RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 NEFHP12036 1026 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 TRHRP34981 398 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-205ENST00000454542 ARG2P78540 354 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 FOXK1P85037 733 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 KIAA0040Q15053 153 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 INAQ16352 499 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 PRR30Q53SZ7 412 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-205ENST00000454542 XKR7Q5GH72 579 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 FCRLBQ6BAA4 426 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 RPUSD3Q6P087 351 aaKnown RBP13.19□□□□□ -0.3
HDAC4-205ENST00000454542 RPS19BP1Q86WX3 136 aaKnown RBP13.19□□□□□ -0.3
HDAC4-205ENST00000454542 MMP21Q8N119 569 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF321PQ8N8H1 164 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 MDS2Q8NDY4 140 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 OR2T11Q8NH01 316 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.19□□□□□ -0.3
HDAC4-205ENST00000454542 SREK1Q8WXA9 508 aaKnown RBP13.19□□□□□ -0.3
HDAC4-205ENST00000454542 DGAT2Q96PD7 388 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 BARD1Q99728 777 aaKnown RBP13.19□□□□□ -0.3
HDAC4-205ENST00000454542 ILKAPQ9H0C8 392 aaPredicted RBP13.19□□□□□ -0.3
HDAC4-205ENST00000454542 EML4Q9HC35 981 aaKnown RBP13.19□□□□□ -0.3
HDAC4-205ENST00000454542 PLA2G3Q9NZ20 509 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 LUZP4Q9P127 313 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 HEY2Q9UBP5 337 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 PCDHGB6Q9Y5F9 930 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 PTGDR2Q9Y5Y4 395 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 CLCA3PQ9Y6N3 262 aa13.19□□□□□ -0.3
HDAC4-205ENST00000454542 TRAV17A0A0B4J275 112 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 A8MUI8 341 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 J3QKU1 62 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 CLPSP04118 112 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 SERPINE1P05121 402 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 IL3P08700 152 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 COX7A2P14406 83 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 MLLT10P55197 1068 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF763Q0D2J5 394 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 TUBA3CQ13748 450 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 CEBPEQ15744 281 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 IMPG1Q17R60 797 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 AGBL2Q5U5Z8 902 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 TUBA3EQ6PEY2 450 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 Q6ZSR9 355 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 NUDCD3Q8IVD9 361 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 CLYBLQ8N0X4 340 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 CATSPER1Q8NEC5 780 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 CPT1CQ8TCG5 803 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 C16orf78Q8WTQ4 265 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 TWIST2Q8WVJ9 160 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 ART5Q96L15 291 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 FAIM2Q9BWQ8 316 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 DEFB126Q9BYW3 111 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 TRIM4Q9C037 500 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 SLAMF7Q9NQ25 335 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 ABI3Q9P2A4 366 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 HAO1Q9UJM8 370 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 TRAF6Q9Y4K3 522 aa13.18□□□□□ -0.3
HDAC4-205ENST00000454542 UBR5O95071 2799 aaPredicted RBP13.18□□□□□ -0.3
HDAC4-205ENST00000454542 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
HDAC4-205ENST00000454542 TMEM120BA0PK00 339 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 TMEM114B3SHH9 223 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 HRKO00198 91 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 SLC28A1O00337 649 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 LSM1O15116 133 aaKnown RBP13.17□□□□□ -0.3
HDAC4-205ENST00000454542 ZFAND5O76080 213 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 ATP1B1P05026 303 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 UQCRHP07919 91 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 CPMP14384 443 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 DRD2P14416 443 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 SOX18P35713 384 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 WDR4P57081 412 aaKnown RBP13.17□□□□□ -0.3
HDAC4-205ENST00000454542 INPP5JQ15735 1006 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-205ENST00000454542 CHI3L2Q15782 390 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 SH2D4BQ5SQS7 431 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF468Q5VIY5 522 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF227Q86WZ6 799 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 C9orf40Q8IXQ3 194 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 OR4K14Q8NGD5 310 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 NUBPLQ8TB37 319 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 ZBTB9Q96C00 473 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 CNRIP1Q96F85 164 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-205ENST00000454542 SCMH1Q96GD3 660 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF764Q96H86 408 aaPredicted RBP13.17□□□□□ -0.3
HDAC4-205ENST00000454542 ZNF681Q96N22 645 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 EBPLQ9BY08 206 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 OR8D2Q9GZM6 311 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 CDCP1Q9H5V8 836 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 CXorf21Q9HAI6 301 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 MYNNQ9NPC7 610 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 STMN3Q9NZ72 180 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 EHD3Q9NZN3 535 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 ZDHHC2Q9UIJ5 367 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 DLGAP4Q9Y2H0 992 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 NTNG1Q9Y2I2 539 aa13.17□□□□□ -0.3
HDAC4-205ENST00000454542 WBP11Q9Y2W2 641 aaKnown RBP13.17□□□□□ -0.3
HDAC4-205ENST00000454542 HELZ2Q9BYK8 2649 aaKnown RBP13.17□□□□□ -0.3
HDAC4-205ENST00000454542 RELNP78509 3460 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 GOLGA6L10A6NI86 522 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 TTLL8A6PVC2 850 aa13.16□□□□□ -0.3
HDAC4-205ENST00000454542 PIP5K1BO14986 540 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms