RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 GP1BBP13224 206 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 HSD3B1P14060 373 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 COX7A2P14406 83 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 HSD3B2P26439 372 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 GALNSP34059 522 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 CRHR1P34998 444 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 SLC18A2Q05940 514 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 RNFT1Q5M7Z0 435 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 OR52E8Q6IFG1 317 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 GFRALQ6UXV0 394 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 ZYG11AQ6WRX3 759 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 GPRIN3Q6ZVF9 776 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 PAGE2Q7Z2X7 111 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 MDGA2Q7Z553 956 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 C9orf40Q8IXQ3 194 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 GPALPP1Q8IXQ4 340 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 TMEM156Q8N614 296 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 CPSF7Q8N684 471 aaKnown RBP13.51□□□□□ -0.25
HSPG2-207ENST00000453796 FAM98AQ8NCA5 519 aaKnown RBP13.51□□□□□ -0.25
HSPG2-207ENST00000453796 TMEM125Q96AQ2 219 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 RBM18Q96H35 190 aaKnown RBP13.51□□□□□ -0.25
HSPG2-207ENST00000453796 FBXL20Q96IG2 436 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 GPR137Q96N19 417 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 HBEGFQ99075 208 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 PELOQ9BRX2 385 aaKnown RBP13.51□□□□□ -0.25
HSPG2-207ENST00000453796 WDR41Q9HAD4 459 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 AHSPQ9NZD4 102 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 SEC14L3Q9UDX4 400 aa13.51□□□□□ -0.25
HSPG2-207ENST00000453796 KLF13Q9Y2Y9 288 aaPredicted RBP13.51□□□□□ -0.25
HSPG2-207ENST00000453796 SMIM23A6NLE4 172 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 WWP2O00308 870 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 OR6B1O95007 311 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 CLPSP04118 112 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 NUDT17P0C025 328 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 CHN1P15882 459 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 KRT15P19012 456 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 SOX3P41225 446 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 HTR6P50406 440 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 PKNOX1P55347 436 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 ALDH6A1Q02252 535 aaKnown RBP13.5□□□□□ -0.25
HSPG2-207ENST00000453796 CSTF3Q12996 717 aaKnown RBP13.5□□□□□ -0.25
HSPG2-207ENST00000453796 LCP2Q13094 533 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 CCDC153Q494R4 210 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 CCNYL2Q5T2Q4 361 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 NDUFAF5Q5TEU4 345 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 SULF2Q8IWU5 870 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 OR2W6PQ8NHA6 318 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 NUBPLQ8TB37 319 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 CHTF18Q8WVB6 975 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 RELTQ969Z4 430 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 CCDC126Q96EE4 140 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 ART5Q96L15 291 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 C12orf65Q9H3J6 166 aaKnown RBP13.5□□□□□ -0.25
HSPG2-207ENST00000453796 VPS29Q9UBQ0 182 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 COPS7AQ9UBW8 275 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 CES1P1Q9UKY3 287 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 GRID1Q9ULK0 1009 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 STK38LQ9Y2H1 464 aa13.5□□□□□ -0.25
HSPG2-207ENST00000453796 NCOA6Q14686 2063 aaPredicted RBP13.5□□□□□ -0.25
HSPG2-207ENST00000453796 SERTM1A2A2V5 107 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 A8MVJ9 347 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 UBFD1O14562 309 aaKnown RBP13.49□□□□□ -0.25
HSPG2-207ENST00000453796 LRRTM2O43300 516 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 NADKO95544 446 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-207ENST00000453796 ESRRBO95718 433 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 KRT6AP02538 564 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 KRT6BP04259 564 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 SLC35E2P0CK97 266 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 MYL2P10916 166 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 CCT5P48643 541 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 KRT6CP48668 564 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 MEOX1P50221 254 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 MAPK12P53778 367 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 SLC37A1P57057 533 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 DNAJB13P59910 316 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 ERVK-8P63133 956 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 MPEG1Q2M385 716 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 KRTCAP3Q53RY4 240 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 PIGGQ5H8A4 983 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 C1QL3Q5VWW1 255 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 WDR93Q6P2C0 686 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 LYPD8Q6UX82 237 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 IL20RBQ6UXL0 311 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 CHERPQ8IWX8 916 aaKnown RBP13.49□□□□□ -0.25
HSPG2-207ENST00000453796 C1orf52Q8N6N3 182 aaKnown RBP13.49□□□□□ -0.25
HSPG2-207ENST00000453796 POGLUT1Q8NBL1 392 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 PSD4Q8NDX1 1056 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 OR5L2Q8NGL0 311 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 C16orf52Q8NHV5 167 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 METTL6Q8TCB7 284 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 DOK4Q8TEW6 326 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 AENQ8WTP8 325 aaKnown RBP13.49□□□□□ -0.25
HSPG2-207ENST00000453796 SREK1Q8WXA9 508 aaKnown RBP13.49□□□□□ -0.25
HSPG2-207ENST00000453796 ASB15Q8WXK1 588 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 TM4SF18Q96CE8 201 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 C11orf24Q96F05 449 aaPredicted RBP13.49□□□□□ -0.25
HSPG2-207ENST00000453796 KCNA7Q96RP8 456 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 ACPTQ9BZG2 426 aa13.49□□□□□ -0.25
HSPG2-207ENST00000453796 TSPAN10Q9H1Z9 355 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms