RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 SAGE2PA6NJ88 616 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 A8MUA0 341 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 SDHDO14521 159 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 ZNF195O14628 629 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 TMPRSS11DO60235 418 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 PCDH7O60245 1069 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 CTNSO60931 367 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 VPS4BO75351 444 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 SEC22BO75396 215 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 ATP6AP2O75787 350 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 MYO1DO94832 1006 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 TGDSO95455 350 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 KLK1P06870 262 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 ALOX15P16050 662 aaPredicted RBP13.7□□□□□ -0.22
VPS16-205ENST00000453689 CPN2P22792 545 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 TPP2P29144 1249 aaPredicted RBP13.7□□□□□ -0.22
VPS16-205ENST00000453689 TIA1P31483 386 aaKnown RBP eCLIP13.7□□□□□ -0.22
VPS16-205ENST00000453689 MLLT10P55197 1068 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 HNRNPH2P55795 449 aaKnown RBP13.7□□□□□ -0.22
VPS16-205ENST00000453689 RPL38P63173 70 aaKnown RBP13.7□□□□□ -0.22
VPS16-205ENST00000453689 KIAA0040Q15053 153 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 PLEKHN1Q494U1 663 aaPredicted RBP13.7□□□□□ -0.22
VPS16-205ENST00000453689 GALNTL6Q49A17 601 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 ATP6AP1LQ52LC2 224 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 CCNYL2Q5T2Q4 361 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 MRM1Q6IN84 353 aaKnown RBP13.7□□□□□ -0.22
VPS16-205ENST00000453689 H3F3CQ6NXT2 135 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 Q6ZS92 163 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 MAVSQ7Z434 540 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 CLNKQ7Z7G1 428 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 LRRC34Q8IZ02 419 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 NFAM1Q8NET5 270 aaPredicted RBP13.7□□□□□ -0.22
VPS16-205ENST00000453689 FCRL1Q96LA6 429 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 KCNK13Q9HB14 408 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 MMP25Q9NPA2 562 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 PHF11Q9UIL8 331 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 SPACA6W5XKT8 324 aa13.7□□□□□ -0.22
VPS16-205ENST00000453689 MYOCOSA0A1B0GUC4 107 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 LDB3O75112 727 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 PEX11AO75192 247 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 GBAP04062 536 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 FAM58BPP0C7Q3 252 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 TROVE2P10155 538 aaKnown RBP eCLIP13.69□□□□□ -0.22
VPS16-205ENST00000453689 PPP2R1BP30154 601 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 MAPK12P53778 367 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 TRA2BP62995 288 aaKnown RBP13.69□□□□□ -0.22
VPS16-205ENST00000453689 RAE1P78406 368 aaKnown RBP13.69□□□□□ -0.22
VPS16-205ENST00000453689 TNFRSF17Q02223 184 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 SMU1Q2TAY7 513 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 C6orf136Q5SQH8 315 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 NOXRED1Q6NXP6 359 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 GPR180Q86V85 440 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 KIF2BQ8N4N8 673 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 FNDC5Q8NAU1 212 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 ELP5Q8TE02 316 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 MAELQ96JY0 434 aaKnown RBP13.69□□□□□ -0.22
VPS16-205ENST00000453689 ZNF317Q96PQ6 595 aaPredicted RBP13.69□□□□□ -0.22
VPS16-205ENST00000453689 SIKE1Q9BRV8 207 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 AKTIPQ9H8T0 292 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 SLAMF7Q9NQ25 335 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 PNO1Q9NRX1 252 aaKnown RBP13.69□□□□□ -0.22
VPS16-205ENST00000453689 FGFR1OP2Q9NVK5 253 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 MS4A12Q9NXJ0 267 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 GIMAP2Q9UG22 337 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 POLR3HQ9Y535 204 aaPredicted RBP13.69□□□□□ -0.22
VPS16-205ENST00000453689 ASB4Q9Y574 426 aa13.69□□□□□ -0.22
VPS16-205ENST00000453689 GNG14A0A1W2PPG7 69 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 BLACEA4D250 179 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 TTLL8A6PVC2 850 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 A8MUI8 341 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 PROM1O43490 865 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 DIAPH2O60879 1101 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 PRKRAO75569 313 aaKnown RBP13.68□□□□□ -0.22
VPS16-205ENST00000453689 MAPK1P28482 360 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 EPHA3P29320 983 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 LSP1P33241 339 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 GSTM5P46439 218 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 GNGT1P63211 74 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 MAD2L1Q13257 205 aaPredicted RBP13.68□□□□□ -0.22
VPS16-205ENST00000453689 SLC9B1Q4ZJI4 515 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 RFTN2Q52LD8 501 aaPredicted RBP13.68□□□□□ -0.22
VPS16-205ENST00000453689 ABHD17BQ5VST6 288 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 C18orf63Q68DL7 685 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 FCRLBQ6BAA4 426 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 EPGNQ6UW88 154 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 LARP4Q71RC2 724 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS16-205ENST00000453689 DNAJB14Q8TBM8 379 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 STON2Q8WXE9 905 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 ANKRD9Q96BM1 317 aaPredicted RBP13.68□□□□□ -0.22
VPS16-205ENST00000453689 CHMP6Q96FZ7 201 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 NPAS2Q99743 824 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 EBPLQ9BY08 206 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 ALOXE3Q9BYJ1 711 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 RPF2Q9H7B2 306 aaKnown RBP13.68□□□□□ -0.22
VPS16-205ENST00000453689 NPHS2Q9NP85 383 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 ADAP2Q9NPF8 381 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 PLA2G3Q9NZ20 509 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 ATG4BQ9Y4P1 393 aa13.68□□□□□ -0.22
VPS16-205ENST00000453689 EXPH5Q8NEV8 1989 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms