RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SLCO6A1Q86UG4 719 aa15.06■□□□□ 0
SNX17-204ENST00000453453 PAQR7Q86WK9 346 aa15.06■□□□□ 0
SNX17-204ENST00000453453 IFNEQ86WN2 208 aa15.06■□□□□ 0
SNX17-204ENST00000453453 CADM3Q8N126 398 aa15.06■□□□□ 0
SNX17-204ENST00000453453 SVOPQ8N4V2 548 aa15.06■□□□□ 0
SNX17-204ENST00000453453 NAT6Q93015 286 aa15.06■□□□□ 0
SNX17-204ENST00000453453 ZDHHC12Q96GR4 267 aa15.06■□□□□ 0
SNX17-204ENST00000453453 SEPHS2Q99611 448 aa15.06■□□□□ 0
SNX17-204ENST00000453453 RAB33BQ9H082 229 aa15.06■□□□□ 0
SNX17-204ENST00000453453 SOX17Q9H6I2 414 aaPredicted RBP15.06■□□□□ 0
SNX17-204ENST00000453453 EPS8L2Q9H6S3 715 aa15.06■□□□□ 0
SNX17-204ENST00000453453 CCL27Q9Y4X3 112 aa15.06■□□□□ 0
SNX17-204ENST00000453453 PCDHGB2Q9Y5G2 931 aa15.06■□□□□ 0
SNX17-204ENST00000453453 KLK4Q9Y5K2 254 aa15.06■□□□□ 0
SNX17-204ENST00000453453 MN1Q10571 1320 aaPredicted RBP15.05■□□□□ 0
SNX17-204ENST00000453453 OR2A25A4D2G3 310 aa15.05■□□□□ -0
SNX17-204ENST00000453453 SAGE2PA6NJ88 616 aa15.05■□□□□ -0
SNX17-204ENST00000453453 NPIPB8E9PQR5 432 aa15.05■□□□□ -0
SNX17-204ENST00000453453 PCSK2P16519 638 aa15.05■□□□□ -0
SNX17-204ENST00000453453 DUSP3P51452 185 aaPredicted RBP15.05■□□□□ -0
SNX17-204ENST00000453453 DIO3P55073 304 aa15.05■□□□□ -0
SNX17-204ENST00000453453 GP2P55259 537 aaKnown RBP15.05■□□□□ -0
SNX17-204ENST00000453453 ACSM2AQ08AH3 577 aa15.05■□□□□ -0
SNX17-204ENST00000453453 SPIN4Q56A73 249 aa15.05■□□□□ -0
SNX17-204ENST00000453453 OTUD3Q5T2D3 398 aaPredicted RBP15.05■□□□□ -0
SNX17-204ENST00000453453 ACSM2BQ68CK6 577 aa15.05■□□□□ -0
SNX17-204ENST00000453453 TCEAL6Q6IPX3 200 aa15.05■□□□□ -0
SNX17-204ENST00000453453 TMEM214Q6NUQ4 689 aaKnown RBP15.05■□□□□ -0
SNX17-204ENST00000453453 DTWD1Q8N5C7 304 aa15.05■□□□□ -0
SNX17-204ENST00000453453 DNAJB8Q8NHS0 232 aa15.05■□□□□ -0
SNX17-204ENST00000453453 TCEAL3Q969E4 200 aa15.05■□□□□ -0
SNX17-204ENST00000453453 CCDC74AQ96AQ1 378 aa15.05■□□□□ -0
SNX17-204ENST00000453453 YIPF6Q96EC8 236 aa15.05■□□□□ -0
SNX17-204ENST00000453453 REXO5Q96IC2 774 aaKnown RBP15.05■□□□□ -0
SNX17-204ENST00000453453 TXNDC15Q96J42 360 aa15.05■□□□□ -0
SNX17-204ENST00000453453 CD180Q99467 661 aa15.05■□□□□ -0
SNX17-204ENST00000453453 SH3GL1Q99961 368 aa15.05■□□□□ -0
SNX17-204ENST00000453453 SARGQ9BW04 601 aa15.05■□□□□ -0
SNX17-204ENST00000453453 ABCG4Q9H172 646 aa15.05■□□□□ -0
SNX17-204ENST00000453453 SEMA6CQ9H3T2 930 aa15.05■□□□□ -0
SNX17-204ENST00000453453 CCNB1IP1Q9NPC3 277 aa15.05■□□□□ -0
SNX17-204ENST00000453453 KLHL20Q9Y2M5 609 aa15.05■□□□□ -0
SNX17-204ENST00000453453 UGT2A1Q9Y4X1 527 aa15.05■□□□□ -0
SNX17-204ENST00000453453 PCDHGA8Q9Y5G5 932 aa15.05■□□□□ -0
SNX17-204ENST00000453453 ORC6Q9Y5N6 252 aa15.05■□□□□ -0
SNX17-204ENST00000453453 A3GALT2U3KPV4 340 aa15.05■□□□□ -0
SNX17-204ENST00000453453 GOLGA4Q13439 2230 aaKnown RBP15.05■□□□□ -0
SNX17-204ENST00000453453 IGHV1OR21-1A0A087WYE8 117 aa15.04■□□□□ -0
SNX17-204ENST00000453453 CPED1A4D0V7 1026 aa15.04■□□□□ -0
SNX17-204ENST00000453453 M0R3G1 203 aa15.04■□□□□ -0
SNX17-204ENST00000453453 CLEC3AO75596 197 aa15.04■□□□□ -0
SNX17-204ENST00000453453 KCNH1O95259 989 aa15.04■□□□□ -0
SNX17-204ENST00000453453 SERPIND1P05546 499 aa15.04■□□□□ -0
SNX17-204ENST00000453453 ZNF806P0C7X5 589 aa15.04■□□□□ -0
SNX17-204ENST00000453453 FUT4P22083 530 aa15.04■□□□□ -0
SNX17-204ENST00000453453 GSSP48637 474 aa15.04■□□□□ -0
SNX17-204ENST00000453453 OR1D5P58170 312 aa15.04■□□□□ -0
SNX17-204ENST00000453453 ISL1P61371 349 aa15.04■□□□□ -0
SNX17-204ENST00000453453 CYP4F2P78329 520 aa15.04■□□□□ -0
SNX17-204ENST00000453453 DAB2P98082 770 aa15.04■□□□□ -0
SNX17-204ENST00000453453 CD47Q08722 323 aa15.04■□□□□ -0
SNX17-204ENST00000453453 FADDQ13158 208 aa15.04■□□□□ -0
SNX17-204ENST00000453453 ZIK1Q3SY52 487 aaPredicted RBP15.04■□□□□ -0
SNX17-204ENST00000453453 ADNP2Q6IQ32 1131 aa15.04■□□□□ -0
SNX17-204ENST00000453453 DLEU7Q6UYE1 221 aa15.04■□□□□ -0
SNX17-204ENST00000453453 HIPK1Q86Z02 1210 aa15.04■□□□□ -0
SNX17-204ENST00000453453 PLXDC1Q8IUK5 500 aa15.04■□□□□ -0
SNX17-204ENST00000453453 PLD3Q8IV08 490 aa15.04■□□□□ -0
SNX17-204ENST00000453453 FAM9CQ8IZT9 166 aa15.04■□□□□ -0
SNX17-204ENST00000453453 ZCCHC7Q8N3Z6 543 aaKnown RBP15.04■□□□□ -0
SNX17-204ENST00000453453 RNF175Q8N4F7 328 aa15.04■□□□□ -0
SNX17-204ENST00000453453 Q8N9G6 341 aaPredicted RBP15.04■□□□□ -0
SNX17-204ENST00000453453 ANKRD53Q8N9V6 530 aa15.04■□□□□ -0
SNX17-204ENST00000453453 MFSD9Q8NBP5 474 aa15.04■□□□□ -0
SNX17-204ENST00000453453 GABARAPL1Q9H0R8 117 aa15.04■□□□□ -0
SNX17-204ENST00000453453 AHSPQ9NZD4 102 aa15.04■□□□□ -0
SNX17-204ENST00000453453 EPHA6Q9UF33 1036 aa15.04■□□□□ -0
SNX17-204ENST00000453453 TPRKBQ9Y3C4 175 aa15.04■□□□□ -0
SNX17-204ENST00000453453 POLR3HQ9Y535 204 aaPredicted RBP15.04■□□□□ -0
SNX17-204ENST00000453453 ARID1BQ8NFD5 2236 aaPredicted RBP15.04■□□□□ -0
SNX17-204ENST00000453453 LNP1A1A4G5 178 aa15.03■□□□□ -0
SNX17-204ENST00000453453 TLCD2A6NGC4 264 aa15.03■□□□□ -0
SNX17-204ENST00000453453 TAF4O00268 1085 aa15.03■□□□□ -0
SNX17-204ENST00000453453 CAPN5O15484 640 aaPredicted RBP15.03■□□□□ -0
SNX17-204ENST00000453453 TGFB1P01137 390 aa15.03■□□□□ -0
SNX17-204ENST00000453453 IL7RP16871 459 aa15.03■□□□□ -0
SNX17-204ENST00000453453 BCL6P41182 706 aa15.03■□□□□ -0
SNX17-204ENST00000453453 GRK6P43250 576 aa15.03■□□□□ -0
SNX17-204ENST00000453453 UFM1P61960 85 aa15.03■□□□□ -0
SNX17-204ENST00000453453 INAQ16352 499 aa15.03■□□□□ -0
SNX17-204ENST00000453453 SYT6Q5T7P8 510 aaPredicted RBP15.03■□□□□ -0
SNX17-204ENST00000453453 EID3Q8N140 333 aa15.03■□□□□ -0
SNX17-204ENST00000453453 SUMF1Q8NBK3 374 aa15.03■□□□□ -0
SNX17-204ENST00000453453 PRSS33Q8NF86 280 aa15.03■□□□□ -0
SNX17-204ENST00000453453 BAHD1Q8TBE0 780 aaPredicted RBP15.03■□□□□ -0
SNX17-204ENST00000453453 FAR1Q8WVX9 515 aa15.03■□□□□ -0
SNX17-204ENST00000453453 C17orf50Q8WW18 174 aa15.03■□□□□ -0
SNX17-204ENST00000453453 RORBQ92753 470 aa15.03■□□□□ -0
SNX17-204ENST00000453453 ATOH1Q92858 354 aaPredicted RBP15.03■□□□□ -0
SNX17-204ENST00000453453 YIPF2Q9BWQ6 316 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms