RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 BBOF1Q8ND07 529 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 TNIP2Q8NFZ5 429 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 MBD3L2Q8NHZ7 208 aaPredicted RBP13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 TANKQ92844 425 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 ISL2Q96A47 359 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 DACH2Q96NX9 599 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 DGAT2Q96PD7 388 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 YIPF4Q9BSR8 244 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 DOHHQ9BU89 302 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 SLC6A15Q9H2J7 730 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 CALHM2Q9HA72 323 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 DNAJC11Q9NVH1 559 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 NSMCE4AQ9NXX6 385 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 CTNNAL1Q9UBT7 734 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 IKZF3Q9UKT9 509 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 PGRMC1O00264 195 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 TP53I11O14683 189 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 LDB3O75112 727 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 TRIM3O75382 744 aaPredicted RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 HPNP05981 417 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 HIST1H1TP22492 207 aaPredicted RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 ATP5A1P25705 553 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 CTSSP25774 331 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 GDF1P27539 372 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 MSH2P43246 934 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 RPP38P78345 283 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 NKX6-1P78426 367 aaPredicted RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 SNTB1Q13884 538 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 E2F2Q14209 437 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 TGFBIQ15582 683 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 SPRED3Q2MJR0 410 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 TMEM198Q66K66 360 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 VASNQ6EMK4 673 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 SYDE1Q6ZW31 735 aaPredicted RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 CHSY3Q70JA7 882 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 ST13P4Q8IZP2 240 aaPredicted RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 ACOT4Q8N9L9 421 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 FAM13CQ8NE31 585 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 ANKRD9Q96BM1 317 aaPredicted RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 TIMP4Q99727 224 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 PIP5K1AQ99755 562 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 ADGRE2Q9UHX3 823 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 PHF11Q9UIL8 331 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 CNOT11Q9UKZ1 510 aaKnown RBP13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 JRKLQ9Y4A0 524 aa13.12□□□□□ -0.31
LYSMD3-202ENST00000453259 IQANK1A0A1B0GTG1 560 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 DNALI1O14645 258 aaPredicted RBP13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 CD53P19397 219 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 CPN2P22792 545 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 TLX1P31314 330 aaPredicted RBP13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 GALNSP34059 522 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 CASP2P42575 452 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 GDF5P43026 501 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 PCYT1AP49585 367 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 ZNF136P52737 540 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 RPS6KA2Q15349 733 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 PPP1R7Q15435 360 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 TSNQ15631 228 aaKnown RBP13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 PDK4Q16654 411 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 AP5B1Q2VPB7 878 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 PRAMEF20Q5VT98 475 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 STEAP4Q687X5 459 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 SULT1C3Q6IMI6 304 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 PRSS57Q6UWY2 283 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 CAPN12Q6ZSI9 719 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 ZC3HC1Q86WB0 502 aaKnown RBP13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 OR10G3Q8NGC4 313 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 TP53INP1Q96A56 240 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 COX4I2Q96KJ9 171 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 F2RL3Q96RI0 385 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 MAPKAP1Q9BPZ7 522 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 CENPKQ9BS16 269 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 MS4A8Q9BY19 250 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 PHACTR1Q9C0D0 580 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 DERL2Q9GZP9 239 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 UBQLN3Q9H347 655 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 ACBD3Q9H3P7 528 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 PROK2Q9HC23 129 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 FETUBQ9UGM5 382 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 ZNF490Q9ULM2 529 aaPredicted RBP13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 EML6Q6ZMW3 1958 aa13.11□□□□□ -0.31
LYSMD3-202ENST00000453259 FAM95CA0A1B0GW59 222 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 FGF17O60258 216 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 STK16O75716 305 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 HRGP04196 525 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 ALOX15P16050 662 aaPredicted RBP13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 GCKP35557 465 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 CDK9P50750 372 aaKnown RBP13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 DOC2AQ14183 400 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 RCAN2Q14206 197 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 ZNF793Q6ZN11 406 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 RNF111Q6ZNA4 994 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 PACS2Q86VP3 889 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 KRTAP1-3Q8IUG1 177 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 SIMC1Q8NDZ2 872 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 ZPLD1Q8TCW7 415 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 NUDT8Q8WV74 236 aa13.1□□□□□ -0.31
LYSMD3-202ENST00000453259 PIGTQ969N2 578 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms