RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 GKN1Q9NS71 199 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 DDX19AQ9NUU7 478 aaKnown RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 WWOXQ9NZC7 414 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 PTTG2Q9NZH5 202 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 TBK1Q9UHD2 729 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 DAPK2Q9UIK4 370 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 TRMT6Q9UJA5 497 aaKnown RBP3.99□□□□□ -1.77
LINC00393-202ENST00000452852 NOTCH4Q99466 2003 aa3.99□□□□□ -1.77
LINC00393-202ENST00000452852 NUP210Q8TEM1 1887 aaPredicted RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 KIF26AQ9ULI4 1882 aaPredicted RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 TRAV24A0A0B4J272 114 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 A0A0U1RQJ8 604 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 C2orf92A0A1B0GVN3 265 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 ILVBLA1L0T0 632 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 ANKRD66B4E2M5 251 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 ANHXE9PGG2 379 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 H0YCG3 227 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 H3BQV1 296 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 I3L4J1 428 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 TLR4O00206 839 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 ZNF197O14709 1029 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 LDB3O75112 727 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 N4BP1O75113 896 aaKnown RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 MT-ATP6P00846 226 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 TGFAP01135 160 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 SERPING1P05155 500 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 TFAP2AP05549 437 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 H1F0P07305 194 aaKnown RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 CCDC192P0DO97 292 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 DLATP10515 647 aaKnown RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 IRF2P14316 349 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 ITGA2P17301 1181 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 UGT1A6P19224 532 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 MARCKSP29966 332 aaPredicted RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 SSTR1P30872 391 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 RPL9P32969 192 aaKnown RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 OR1D2P34982 312 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 GNL1P36915 607 aaPredicted RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 MAGEA9P43362 315 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 ARPP19P56211 112 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 CLDN15P56746 228 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 GMFBP60983 142 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 CX3CL1P78423 397 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 NTHL1P78549 312 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 PDIA5Q14554 519 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 KARSQ15046 597 aaKnown RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 MLF2Q15773 248 aaPredicted RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 UPP1Q16831 310 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 UGP2Q16851 508 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 TAF1BQ53T94 588 aaPredicted RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 OR6B2Q6IFH4 312 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 SIGLEC15Q6ZMC9 328 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 ASPGQ86U10 573 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 FJX1Q86VR8 437 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 MEX3DQ86XN8 651 aaKnown RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 RASGEF1AQ8N9B8 481 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 OR11H4Q8NGC9 324 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 OR4K1Q8NGD4 311 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 LNX1Q8TBB1 728 aaPredicted RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 TMEM255BQ8WV15 326 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 NUDCD2Q8WVJ2 157 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 ING5Q8WYH8 240 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 FGF13Q92913 245 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 FGF14Q92915 247 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 WBP2Q969T9 261 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 PHF21BQ96EK2 531 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 BICD1Q96G01 975 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 EEF2KMTQ96G04 330 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 CCDC3Q9BQI4 270 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 CSTL1Q9H114 145 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 PELI2Q9HAT8 420 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 UPF2Q9HAU5 1272 aaKnown RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 TMEM30AQ9NV96 361 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 CGNQ9P2M7 1197 aaKnown RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 RUVBL2Q9Y230 463 aaKnown RBP3.98□□□□□ -1.77
LINC00393-202ENST00000452852 AP1M2Q9Y6Q5 423 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 RALGAPA1Q6GYQ0 2036 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 DNAH14Q0VDD8 3507 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 TSC2P49815 1807 aa3.98□□□□□ -1.77
LINC00393-202ENST00000452852 DENND4CQ5VZ89 1909 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 SMIM28A0A1B0GU29 152 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ZCWPW2A0A1B0GU75 182 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 CLEC18AA5D8T8 446 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 LILRA5A6NI73 299 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 PLOD2O00469 737 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 GAPDHSO14556 408 aaPredicted RBP3.97□□□□□ -1.77
LINC00393-202ENST00000452852 NDC80O14777 642 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 SLC16A4O15374 487 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 CLDN3O15551 220 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ADAM12O43184 909 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ZNHIT1O43257 154 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 BUD23O43709 281 aaKnown RBP3.97□□□□□ -1.77
LINC00393-202ENST00000452852 SNX3O60493 162 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 ECI2O75521 394 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 GAGE7O76087 117 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 MOCS2O96007 188 aaPredicted RBP3.97□□□□□ -1.77
LINC00393-202ENST00000452852 C9P02748 559 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 HEXBP07686 556 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 SP9P0CG40 484 aa3.97□□□□□ -1.77
LINC00393-202ENST00000452852 GAGE12FP0CL80 117 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms