RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 UBXN8O00124 270 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 ITM2AO43736 263 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 SH3BGRLO75368 114 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 NEURL1O76050 574 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 ARL1P40616 181 aaPredicted RBP20.18■□□□□ 0.82
C9orf3-208ENST00000451893 HLCSP50747 726 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 RAP1GDS1P52306 607 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 LIM2P55344 173 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 PHEXP78562 749 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 DDX39BQ13838 428 aaKnown RBP20.18■□□□□ 0.82
C9orf3-208ENST00000451893 PFKFB4Q16877 469 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 AP5B1Q2VPB7 878 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 ZNF678Q5SXM1 525 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 CES4AQ5XG92 561 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 MED27Q6P2C8 311 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 ABHD17CQ6PCB6 329 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 CHSY3Q70JA7 882 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 ZNF771Q7L3S4 317 aaPredicted RBP20.18■□□□□ 0.82
C9orf3-208ENST00000451893 CYP4Z2PQ8N1L4 340 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 TMEM132CQ8N3T6 1108 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 CCNYL1Q8N7R7 359 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 NCLNQ969V3 563 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 FRMD6Q96NE9 622 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 F2RL3Q96RI0 385 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 SORT1Q99523 831 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 AICDAQ9GZX7 198 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 VTI1BQ9UEU0 232 aa20.18■□□□□ 0.82
C9orf3-208ENST00000451893 KLRC4-KLRK1H3BQV0 150 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 TFECO14948 347 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-208ENST00000451893 NME2P1O60361 137 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 ZFAND5O76080 213 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 EPB42P16452 691 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 NME2P22392 152 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 SSR2P43308 183 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 RPTNQ6XPR3 784 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 FRMD7Q6ZUT3 714 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 MRGPRGQ86SM5 289 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 SCUBE1Q8IWY4 988 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 GHDCQ8N2G8 530 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 PTGR2Q8N8N7 351 aaPredicted RBP20.17■□□□□ 0.82
C9orf3-208ENST00000451893 STON2Q8WXE9 905 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 DAZLQ92904 295 aaKnown RBP20.17■□□□□ 0.82
C9orf3-208ENST00000451893 PHF21BQ96EK2 531 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 CCDC120Q96HB5 630 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 TMEM237Q96Q45 408 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 C20orf27Q9GZN8 174 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 NPHS2Q9NP85 383 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 DAPP1Q9UN19 280 aa20.17■□□□□ 0.82
C9orf3-208ENST00000451893 ASPDHA6ND91 283 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 K7EPI3 171 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 HNRNPRO43390 633 aaKnown RBP20.16■□□□□ 0.82
C9orf3-208ENST00000451893 ITGA10O75578 1167 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 SERPINB1P30740 379 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 RPL14P50914 215 aaKnown RBP20.16■□□□□ 0.82
C9orf3-208ENST00000451893 SSR4P51571 173 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 SMSP52788 366 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 ARFIP2P53365 341 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 SETDB1Q15047 1291 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 ELAVL1Q15717 326 aaKnown RBP20.16■□□□□ 0.82
C9orf3-208ENST00000451893 TBCCQ15814 346 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 ADPRMQ3LIE5 342 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 ARL13AQ5H913 290 aaPredicted RBP20.16■□□□□ 0.82
C9orf3-208ENST00000451893 ZNF468Q5VIY5 522 aaPredicted RBP20.16■□□□□ 0.82
C9orf3-208ENST00000451893 ADNP2Q6IQ32 1131 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 EID3Q8N140 333 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 CPSF7Q8N684 471 aaKnown RBP20.16■□□□□ 0.82
C9orf3-208ENST00000451893 NFAM1Q8NET5 270 aaPredicted RBP20.16■□□□□ 0.82
C9orf3-208ENST00000451893 WDR34Q96EX3 536 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 QRFPRQ96P65 431 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 CSF3RQ99062 836 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 TBCDQ9BTW9 1192 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 TINAGQ9UJW2 476 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 ZNF490Q9ULM2 529 aaPredicted RBP20.16■□□□□ 0.82
C9orf3-208ENST00000451893 STK38LQ9Y2H1 464 aa20.16■□□□□ 0.82
C9orf3-208ENST00000451893 NBPF19A0A087WUL8 3843 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 A8MVJ9 347 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 DYRK3O43781 588 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 TGFB1P01137 390 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 COX7A2P14406 83 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 ALOX15P16050 662 aaPredicted RBP20.15■□□□□ 0.82
C9orf3-208ENST00000451893 CPN2P22792 545 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 PPP2R1BP30154 601 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 MEOX1P50221 254 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 SERTAD2Q14140 314 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 PCBP2Q15366 365 aaKnown RBP eCLIP20.15■□□□□ 0.823e-8■■■□□ 18.9
C9orf3-208ENST00000451893 C3AR1Q16581 482 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 TMEM35AQ53FP2 167 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 UNC50Q53HI1 259 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 SP5Q6BEB4 398 aaPredicted RBP20.15■□□□□ 0.82
C9orf3-208ENST00000451893 VN1R5Q7Z5H4 357 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 ZNF808Q8N4W9 903 aaPredicted RBP20.15■□□□□ 0.82
C9orf3-208ENST00000451893 TEX9Q8N6V9 391 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 POGLUT1Q8NBL1 392 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 APCDD1LQ8NCL9 501 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 C10orf82Q8WW14 230 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 ASB15Q8WXK1 588 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 MARVELD3Q96A59 401 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 CMTM7Q96FZ5 175 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 ALOXE3Q9BYJ1 711 aa20.15■□□□□ 0.82
C9orf3-208ENST00000451893 LYRM4Q9HD34 91 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms