RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 IQCF3P0C7M6 154 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 POU2F1P14859 743 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 CPEP16870 476 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 BPIP17213 487 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 POU3F2P20265 443 aaPredicted RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 RAB3BP20337 219 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 UBA1P22314 1058 aaKnown RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 EIF1P41567 113 aaKnown RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 HMGCS1Q01581 520 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 RBBP4Q09028 425 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 SP140Q13342 867 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 MANEALQ5VSG8 457 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 PAQR6Q6TCH4 344 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 ALKAL2Q6UX46 152 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 USP30Q70CQ3 517 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 TRMT11Q7Z4G4 463 aaKnown RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 FGD2Q7Z6J4 655 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 GPSM1Q86YR5 675 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 OR1M1Q8NGA1 313 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 LPPQ93052 612 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 TCEAL3Q969E4 200 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 RFT1Q96AA3 541 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 MTFMTQ96DP5 389 aaKnown RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 MRPS24Q96EL2 167 aaKnown RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 C1GALT1C1Q96EU7 318 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 IL4I1Q96RQ9 567 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 ATF6BQ99941 703 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 MAPKAP1Q9BPZ7 522 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 TREX2Q9BQ50 279 aaPredicted RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 TCF25Q9BQ70 676 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 DPH2Q9BQC3 489 aaPredicted RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 C12orf49Q9H741 205 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 METTL17Q9H7H0 456 aaPredicted RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 ATP13A1Q9HD20 1204 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 MBD2Q9UBB5 411 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 ZMYM5Q9UJ78 669 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 YARS2Q9Y2Z4 477 aaKnown RBP8.22□□□□□ -1.09
LSM5-208ENST00000450169 SNX11Q9Y5W9 270 aa8.22□□□□□ -1.09
LSM5-208ENST00000450169 A0A0G2JPF8 293 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 OR6C65A6NJZ3 312 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 C2orf81A6NN90 581 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 HNRNPCL3B7ZW38 293 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 D6RAR5 112 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 OR7A17O14581 309 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 PPEF2O14830 753 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 FFAR3O14843 346 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 GPR42O15529 346 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 SUV39H1O43463 412 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 RASGRP1O95267 797 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 GLUD1P00367 558 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 C1QCP02747 245 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 TCRBP04435 133 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 SMIM6P0DI80 62 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 HNRNPCL4P0DMR1 293 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 SELLP14151 372 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 CCR1P32246 355 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 CNR2P34972 360 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 RABGGTBP53611 331 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 CDH12P55289 794 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 RPS25P62851 125 aaKnown RBP8.21□□□□□ -1.1
LSM5-208ENST00000450169 SPIBQ01892 262 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 GRIN2CQ14957 1233 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 NCF4Q15080 339 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 ZNF528Q3MIS6 628 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 TCTE1Q5JU00 501 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 SPOUT1Q5T280 376 aaKnown RBP8.21□□□□□ -1.1
LSM5-208ENST00000450169 MZT2AQ6P582 158 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 SHFQ7M4L6 423 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 GOLGA7Q7Z5G4 137 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 LRRTM3Q86VH5 581 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 PTOV1Q86YD1 416 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 ARHGAP12Q8IWW6 846 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 LAS2Q8IYD9 372 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 ZNF295-AS1Q8N0V1 137 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 FAM46DQ8NEK8 389 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 MDGA1Q8NFP4 955 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 OR9Q2Q8NGE9 314 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 OR4C15Q8NGM1 316 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 WDR20Q8TBZ3 569 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 SCARB1Q8WTV0 552 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 SFT2D1Q8WV19 159 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 KCNJ9Q92806 393 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 GTPBP3Q969Y2 492 aaKnown RBP8.21□□□□□ -1.1
LSM5-208ENST00000450169 ELMOD3Q96FG2 381 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 SENP5Q96HI0 755 aaPredicted RBP8.21□□□□□ -1.1
LSM5-208ENST00000450169 DDOQ99489 341 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 THAP7Q9BT49 309 aaPredicted RBP8.21□□□□□ -1.1
LSM5-208ENST00000450169 COLEC11Q9BWP8 271 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 DUSP16Q9BY84 665 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 FAM126AQ9BYI3 521 aaPredicted RBP8.21□□□□□ -1.1
LSM5-208ENST00000450169 TKTL2Q9H0I9 626 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 ZNF408Q9H9D4 720 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 FZD3Q9NPG1 666 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 NDUFAF4Q9P032 175 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 GSTK1Q9Y2Q3 226 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 MED16Q9Y2X0 877 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 NPTNQ9Y639 398 aa8.21□□□□□ -1.1
LSM5-208ENST00000450169 SPIN1Q9Y657 262 aaPredicted RBP8.21□□□□□ -1.1
LSM5-208ENST00000450169 LRRC72A6NJI9 287 aa8.2□□□□□ -1.1
LSM5-208ENST00000450169 ZAR1LA6NP61 321 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms