RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 RECKO95980 971 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 XKP51811 444 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TARDBPQ13148 414 aaKnown RBP eCLIP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 KRR1Q13601 381 aaKnown RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 NXNL2Q5VZ03 156 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 CCDC80Q76M96 950 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 PARS2Q7L3T8 475 aaKnown RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TOX2Q96NM4 488 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 POLR2J2Q9GZM3 115 aaKnown RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 SYNDIG1Q9H7V2 258 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 HHATLQ9HCP6 504 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 GOLGA4Q13439 2230 aaKnown RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D3DA0A087WVF3 549 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D3IA0A087WXS9 549 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D3EA0A087X179 549 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D3KA0A087X1G2 549 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 SH3D21A4FU49 640 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D3FA6NER0 549 aaPredicted RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D3LB9A6J9 549 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D3HP0C7X1 549 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 ZNF10P21506 573 aaPredicted RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 LIMS1P48059 325 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 PCBP3P57721 371 aaKnown RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 PDE7AQ13946 482 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 LRRC26Q2I0M4 334 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 ZNF805Q5CZA5 627 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D3GQ6DHY5 549 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D3CQ6IPX1 549 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TMIGD1Q6UXZ0 262 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TECPR1Q7Z6L1 1165 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D3Q8IZP1 549 aaPredicted RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 UBE2J2Q8N2K1 259 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 VN1R2Q8NFZ6 395 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 KLHL6Q8WZ60 621 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TRMT61AQ96FX7 289 aaKnown RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 CNOT2Q9NZN8 540 aaKnown RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TRPC4Q9UBN4 977 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 IDH3BO43837 385 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 SLITRK5O94991 958 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 CTSEP14091 401 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 SYN1P17600 705 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 UQCRC2P22695 453 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 BMPR1AP36894 532 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 MAPK12P53778 367 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 PNLIPRP1P54315 467 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 SPHARQ15513 63 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 PPP2R2DQ66LE6 453 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 IL17RDQ8NFM7 739 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 F2RL3Q96RI0 385 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 WFDC6Q9BQY6 131 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TSSK6Q9BXA6 273 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 BARHL1Q9BZE3 327 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 POLR2J3Q9H1A7 115 aaKnown RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 SLAMF7Q9NQ25 335 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 SPHK2Q9NRA0 654 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 ZNF221Q9UK13 617 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 GPSM3Q9Y4H4 160 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 SNX11Q9Y5W9 270 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 FOXE1O00358 373 aaPredicted RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 MYL12BO14950 172 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 SLC28A2O43868 658 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 CXCL10P02778 98 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 SRPRAP08240 638 aaKnown RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 OSMP13725 252 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 PSMA1P25786 263 aaKnown RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 RUNX1T1Q06455 604 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 BCL2A1Q16548 175 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TMPRSS11AQ6ZMR5 421 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 DPPA4Q7L190 304 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 ST13P5Q8NFI4 369 aaPredicted RBP10.76□□□□□ -0.69
SYVN1-204ENST00000449943 TMEM80Q96HE8 168 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 BBS4Q96RK4 519 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 MUTYHQ9UIF7 546 aa10.76□□□□□ -0.69
SYVN1-204ENST00000449943 KIAA0100Q14667 2235 aaKnown RBP10.75□□□□□ -0.69
SYVN1-204ENST00000449943 FEZF1A0PJY2 475 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 WASH3PC4AMC7 463 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 ANHXE9PGG2 379 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 H3BQ06 376 aaPredicted RBP10.75□□□□□ -0.69
SYVN1-204ENST00000449943 STATHP02808 62 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 CD72P21854 359 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 CSTF2P33240 577 aaKnown RBP eCLIP10.75□□□□□ -0.69
SYVN1-204ENST00000449943 INPP1P49441 399 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 SKP1P63208 163 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 MRPS15P82914 257 aaKnown RBP10.75□□□□□ -0.69
SYVN1-204ENST00000449943 PRAMEF14Q5SWL7 426 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 AGAP6Q5VW22 663 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 PRAMEF13Q5VWM6 474 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 LAS2Q8IYD9 372 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 GPR32P1Q8NGA4 272 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 ZNF514Q96K75 400 aaPredicted RBP10.75□□□□□ -0.69
SYVN1-204ENST00000449943 AGAP4Q96P64 663 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 SPATA7Q9P0W8 599 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 FBXL21Q9UKT6 434 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 TBC1D24Q9ULP9 559 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 TLX2O43763 284 aaPredicted RBP10.75□□□□□ -0.69
SYVN1-204ENST00000449943 H1F0P07305 194 aaKnown RBP10.75□□□□□ -0.69
SYVN1-204ENST00000449943 ADH5P11766 374 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 ELAVL4P26378 380 aaKnown RBP10.75□□□□□ -0.69
SYVN1-204ENST00000449943 MMP12P39900 470 aa10.75□□□□□ -0.69
SYVN1-204ENST00000449943 ZNF91Q05481 1191 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms