RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 TMEM107Q6UX40 140 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 ALKAL1Q6UXT8 129 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF852Q6ZMS4 543 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 LCNL1Q6ZST4 164 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 CDHR3Q6ZTQ4 885 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM92BQ6ZTR7 304 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SSX9Q7RTT3 188 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 C16orf62Q7Z3J2 963 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SYVN1Q86TM6 617 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM160B2Q86V87 743 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SERINC5Q86VE9 423 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 MON1AQ86VX9 555 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 METTL23Q86XA0 190 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 RASAL3Q86YV0 1011 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 KLBQ86Z14 1044 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 IGDCC3Q8IVU1 814 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 CBR4Q8N4T8 237 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRAM1L1Q8N609 369 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 UXS1Q8NBZ7 420 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 FBXO15Q8NCQ5 510 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 NUDT10Q8NFP7 164 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 NLGN4YQ8NFZ3 816 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR1N1Q8NGS0 311 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR2T4Q8NH00 348 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 HUS1BQ8NHY5 278 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 MCFD2Q8NI22 146 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 XAGE5Q8WWM1 108 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 DDX17Q92841 729 aaKnown RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 GCDHQ92947 438 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 RFKQ969G6 155 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 MYLPFQ96A32 169 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SPSB4Q96A44 273 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM122AQ96E09 287 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRMT61AQ96FX7 289 aaKnown RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 NUDT11Q96G61 164 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 FBXL20Q96IG2 436 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SERAC1Q96JX3 654 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM71F1Q96KD3 344 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 NSMCE2Q96MF7 247 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 CAMK1GQ96NX5 476 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 COL21A1Q96P44 957 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF385AQ96PM9 386 aaKnown RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 NEDD4LQ96PU5 975 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 DIRC2Q96SL1 478 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 RTP3Q9BQQ7 232 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SH2D3AQ9BRG2 576 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 MRI1Q9BV20 369 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 FTHL17Q9BXU8 183 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 MCOLN1Q9GZU1 580 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 NUAK2Q9H093 628 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SDCBP2Q9H190 292 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 OPN3Q9H1Y3 402 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 MUC13Q9H3R2 512 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 RNF121Q9H920 327 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 C3orf14Q9HBI5 128 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SAYSD1Q9NPB0 183 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 ACP6Q9NPH0 428 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 ASCL3Q9NQ33 180 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 TLR8Q9NR97 1041 aaKnown RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 DUSP22Q9NRW4 184 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 BLOC1S4Q9NUP1 217 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 DNAJC11Q9NVH1 559 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 USE1Q9NZ43 259 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 PPP4R1LQ9P1A2 415 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 UBQLN2Q9UHD9 624 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 NUFIP1Q9UHK0 495 aaKnown RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SCP2D1Q9UJQ7 156 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 FEM1BQ9UK73 627 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 INTS6Q9UL03 887 aaKnown RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 CA14Q9ULX7 337 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC45A2Q9UMX9 530 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 SNX6Q9UNH7 406 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 KLHL20Q9Y2M5 609 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 HSPB11Q9Y547 144 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 LYVE1Q9Y5Y7 322 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 NPTNQ9Y639 398 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 FPGT-TNNI3KV9GXZ4 949 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 V9GYH0 126 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 DUOX1Q9NRD9 1551 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 LTN1O94822 1766 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 UBR2Q8IWV8 1755 aa3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF638Q14966 1978 aaKnown RBP3.45□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM205AQ6ZU69 1335 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 AHDC1Q5TGY3 1603 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 A0A1W2PN81 502 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 A0A1W2PP18 115 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR2A25A4D2G3 310 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM74A7A6NL05 159 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 CXorf49A8MYA2 514 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF879B4DU55 563 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 KBTBD13C9JR72 458 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 E5RI56 91 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 NEDD8-MDP1E9PL57 170 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 NPIPB8E9PQR5 432 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 UBE2Q2LH0YL09 131 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 H7C0S8 307 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 KCNK1O00180 336 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC28A1O00337 649 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 QSOX1O00391 747 aa3.44□□□□□ -1.86
HMGB3P8-201ENST00000449709 BTN3A3O00478 584 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms