RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 FRMD6Q96NE9 622 aa13.06□□□□□ -0.32
RTFDC1-204ENST00000449062 AHSPQ9NZD4 102 aa13.06□□□□□ -0.32
RTFDC1-204ENST00000449062 GRID1Q9ULK0 1009 aa13.06□□□□□ -0.32
RTFDC1-204ENST00000449062 SNX6Q9UNH7 406 aa13.06□□□□□ -0.32
RTFDC1-204ENST00000449062 OSGIN2Q9Y236 505 aa13.06□□□□□ -0.32
RTFDC1-204ENST00000449062 SLC5A6Q9Y289 635 aa13.06□□□□□ -0.32
RTFDC1-204ENST00000449062 FCHO1O14526 889 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 GLRA3O75311 464 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 ESRRBO95718 433 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 MLYCDO95822 493 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 CLPSP04118 112 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 NR2F6P10588 404 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 HSD3B1P14060 373 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 HSD3B2P26439 372 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 SOX18P35713 384 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 ARL1P40616 181 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 BUD31P41223 144 aaPredicted RBP13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 PKNOX1P55347 436 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 KCNK10P57789 538 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 DNAJB13P59910 316 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 LCP2Q13094 533 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 MAPKAPK3Q16644 382 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 PIGGQ5H8A4 983 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 CCNYL2Q5T2Q4 361 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 CHERPQ8IWX8 916 aaKnown RBP13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 TMEM178AQ8NBL3 297 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 METTL6Q8TCB7 284 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 RELTQ969Z4 430 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 FBXL20Q96IG2 436 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 C5orf34Q96MH7 638 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 RASL10BQ96S79 203 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 OXSMQ9NWU1 459 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 VPS29Q9UBQ0 182 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 SLC12A4Q9UP95 1085 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 PCDHA9Q9Y5H5 950 aa13.05□□□□□ -0.32
RTFDC1-204ENST00000449062 WWP2O00308 870 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 LRRTM2O43300 516 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 ULK1O75385 1050 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 OR6B1O95007 311 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 SLU7O95391 586 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 KRT15P19012 456 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 KRT4P19013 534 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 S1PR1P21453 382 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 HTR6P50406 440 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 SSR4P51571 173 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 NAGLUP54802 743 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 FOXA1P55317 472 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 RAE1P78406 368 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 MGAT2Q10469 447 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 ELOAQ14241 798 aaKnown RBP13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 MPEG1Q2M385 716 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 SPRED3Q2MJR0 410 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 CCDC153Q494R4 210 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 KRTCAP3Q53RY4 240 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 NDUFAF5Q5TEU4 345 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 LYPD8Q6UX82 237 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 PAGE2Q7Z2X7 111 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 SULF2Q8IWU5 870 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 C9orf40Q8IXQ3 194 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 TMEM156Q8N614 296 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 GBP7Q8N8V2 638 aaPredicted RBP13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 OR5L2Q8NGL0 311 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 NUBPLQ8TB37 319 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 DOK4Q8TEW6 326 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 AGAP11Q8TF27 550 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 CCDC126Q96EE4 140 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 DGAT2Q96PD7 388 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 HBEGFQ99075 208 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 ACPTQ9BZG2 426 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 CXorf21Q9HAI6 301 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 PRM3Q9NNZ6 103 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 TNFRSF12AQ9NP84 129 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 DEPPQ9NTK1 212 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 SIRT5Q9NXA8 310 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 LGALS13Q9UHV8 139 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 ZNF835Q9Y2P0 537 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 TIMM22Q9Y584 194 aa13.04□□□□□ -0.32
RTFDC1-204ENST00000449062 TEX15Q9BXT5 2789 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 GTF3C1Q12789 2109 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 SMIM23A6NLE4 172 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 UNC5CO95185 931 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 NADKO95544 446 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 KRT6AP02538 564 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 KRT6BP04259 564 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 ENO1P06733 434 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 MYL2P10916 166 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 GP1BBP13224 206 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 COX7A2P14406 83 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 CPA3P15088 417 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 SOX3P41225 446 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 KRT6CP48668 564 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 XKP51811 444 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 SLC37A1P57057 533 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 TRA2BP62995 288 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 PLIN5Q00G26 463 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 FUT7Q11130 342 aa13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 CSTF3Q12996 717 aaKnown RBP13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 ZNF267Q14586 743 aaPredicted RBP13.03□□□□□ -0.32
RTFDC1-204ENST00000449062 ZNF750Q32MQ0 723 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms