RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MYZAPP0CAP1 466 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 PRF1P14222 555 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 TNNI3P19429 210 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 TPP2P29144 1249 aaPredicted RBP13.59□□□□□ -0.23
USP39-206ENST00000448971 CLCN2P51788 898 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 MAPK12P53778 367 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 FOLH1Q04609 750 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 ZNF169Q14929 603 aaPredicted RBP13.59□□□□□ -0.23
USP39-206ENST00000448971 MEP1AQ16819 746 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 IMPG1Q17R60 797 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 OR52E8Q6IFG1 317 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 MRM1Q6IN84 353 aaKnown RBP13.59□□□□□ -0.23
USP39-206ENST00000448971 CROCCP2Q86T23 111 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 CRLF3Q8IUI8 442 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 OR4N5Q8IXE1 308 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 BEST3Q8N1M1 668 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 METTL4Q8N3J2 472 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 TMEM132CQ8N3T6 1108 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 C1orf52Q8N6N3 182 aaKnown RBP13.59□□□□□ -0.23
USP39-206ENST00000448971 OR14A16Q8NHC5 309 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 DAZLQ92904 295 aaKnown RBP13.59□□□□□ -0.23
USP39-206ENST00000448971 NCLNQ969V3 563 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 VMP1Q96GC9 406 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 DGAT2Q96PD7 388 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 MECRQ9BV79 373 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 ACPTQ9BZG2 426 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 TEX10Q9NXF1 929 aaPredicted RBP13.59□□□□□ -0.23
USP39-206ENST00000448971 PLA2G3Q9NZ20 509 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 VPS29Q9UBQ0 182 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 ADAM29Q9UKF5 820 aa13.59□□□□□ -0.23
USP39-206ENST00000448971 PCNX1Q96RV3 2341 aa13.58□□□□□ -0.23
USP39-206ENST00000448971 ADGRG4Q8IZF6 3080 aa13.58□□□□□ -0.23
USP39-206ENST00000448971 OR5H15A6NDH6 313 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 GLOD5A6NK44 160 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 C17orf105B2RV13 164 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 UBFD1O14562 309 aaKnown RBP13.58□□□□□ -0.24
USP39-206ENST00000448971 DYRK3O43781 588 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 WDPCPO95876 746 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 CREB1P16220 341 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 ALDH3A1P30838 453 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 FOXA1P55317 472 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 GALNT1Q10472 559 aaPredicted RBP13.58□□□□□ -0.24
USP39-206ENST00000448971 ELOAQ14241 798 aaKnown RBP13.58□□□□□ -0.24
USP39-206ENST00000448971 ACER2Q5QJU3 275 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 SCIMPQ6UWF3 145 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 GBP7Q8N8V2 638 aaPredicted RBP13.58□□□□□ -0.24
USP39-206ENST00000448971 C7orf57Q8NEG2 295 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 NFAM1Q8NET5 270 aaPredicted RBP13.58□□□□□ -0.24
USP39-206ENST00000448971 SUN3Q8TAQ9 357 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 ELP5Q8TE02 316 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 TANKQ92844 425 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 DEFB126Q9BYW3 111 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 OR8D2Q9GZM6 311 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 RNF32Q9H0A6 362 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 STMN3Q9NZ72 180 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 FIS1Q9Y3D6 152 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 ASB4Q9Y574 426 aa13.58□□□□□ -0.24
USP39-206ENST00000448971 TRAV17A0A0B4J275 112 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 A0A1W2PR48 441 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 GABRR3A8MPY1 467 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 FCHO1O14526 889 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 LRRTM2O43300 516 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 PROM1O43490 865 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 PCDH7O60245 1069 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 OR10H2O60403 315 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 GUCY1B2O75343 617 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 CHN1P15882 459 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 ELAVL4P26378 380 aaKnown RBP13.57□□□□□ -0.24
USP39-206ENST00000448971 STT3AP46977 705 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 HMGCS1Q01581 520 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 OC90Q02509 493 aaPredicted RBP13.57□□□□□ -0.24
USP39-206ENST00000448971 ACSM2AQ08AH3 577 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 TBL3Q12788 808 aaKnown RBP13.57□□□□□ -0.24
USP39-206ENST00000448971 SPIN4Q56A73 249 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 NDUFAF5Q5TEU4 345 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 ACSM2BQ68CK6 577 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 LRIG3Q6UXM1 1119 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 LGI4Q8N135 537 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 APCDD1LQ8NCL9 501 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 CATSPER1Q8NEC5 780 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 OR1N1Q8NGS0 311 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 THAP3Q8WTV1 239 aaPredicted RBP13.57□□□□□ -0.24
USP39-206ENST00000448971 ANKRD9Q96BM1 317 aaPredicted RBP13.57□□□□□ -0.24
USP39-206ENST00000448971 KCNK17Q96T54 332 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 PELOQ9BRX2 385 aaKnown RBP13.57□□□□□ -0.24
USP39-206ENST00000448971 TRMOQ9BU70 441 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 TMUB1Q9BVT8 246 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 GATA5Q9BWX5 397 aaPredicted RBP13.57□□□□□ -0.24
USP39-206ENST00000448971 CDCP1Q9H5V8 836 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 AGPAT4Q9NRZ5 378 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 ANKRD10Q9NXR5 420 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 COPS7AQ9UBW8 275 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 VTI1BQ9UEU0 232 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 TACC2O95359 2948 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 CELSR1Q9NYQ6 3014 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 CPAMD8Q8IZJ3 1885 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 DCHS2Q6V1P9 2916 aa13.57□□□□□ -0.24
USP39-206ENST00000448971 GNG14A0A1W2PPG7 69 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 GOLGA6L10A6NI86 522 aa13.56□□□□□ -0.24
USP39-206ENST00000448971 C3orf80F5H4A9 247 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms