RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 USP39Q53GS9 565 aaKnown RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 RUNDC3AQ59EK9 446 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 AGBL4Q5VU57 503 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 NAPEPLDQ6IQ20 393 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 FIP1L1Q6UN15 594 aaKnown RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 KDELC1Q6UW63 502 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 CFAP77Q6ZQR2 320 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 GPRIN3Q6ZVF9 776 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 CYP4Z1Q86W10 505 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 P3H2Q8IVL5 708 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 C2CD4AQ8NCU7 369 aaPredicted RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 ZNF548Q8NEK5 533 aaPredicted RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 NLGN4YQ8NFZ3 816 aaPredicted RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 OR2T12Q8NG77 320 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 ELMO1Q92556 727 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 ZC3H10Q96K80 434 aaKnown RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 MGME1Q9BQP7 344 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 PRRG3Q9BZD7 231 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 CLEC4MQ9H2X3 399 aaPredicted RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 RIBC2Q9H4K1 309 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 IL36AQ9UHA7 158 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 EVLQ9UI08 416 aaPredicted RBP12.46□□□□□ -0.41
DDX56-206ENST00000446987 KCNK7Q9Y2U2 307 aa12.46□□□□□ -0.41
DDX56-206ENST00000446987 hCG_1807616A0A1W2PRN6 198 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 GSTA4O15217 222 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 PLA2G10O15496 165 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 DPM1O60762 260 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 ZNF217O75362 1048 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 ADH1BP00325 375 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 FAM157BP0CG42 384 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 ITGALP20701 1170 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 SAT1P21673 171 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 C5AR1P21730 350 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 CCT3P49368 545 aaKnown RBP12.46□□□□□ -0.42
DDX56-206ENST00000446987 TAS2R38P59533 333 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 SSTP61278 116 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 PRKG2Q13237 762 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 LARS2Q15031 903 aaKnown RBP12.46□□□□□ -0.42
DDX56-206ENST00000446987 ARSIQ5FYB1 569 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 PCID2Q5JVF3 399 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 PIP5KL1Q5T9C9 394 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 BICRALQ6AI39 1079 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 ENPP6Q6UWR7 440 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 PAMR1Q6UXH9 720 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 USP30Q70CQ3 517 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 ASCL5Q7RTU5 278 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 PID1Q7Z2X4 250 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 LUZP2Q86TE4 346 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 TMEM151BQ8IW70 566 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 CLRN3Q8NCR9 226 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 TMIEQ8NEW7 156 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 OR8K3Q8NH51 312 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 GPR151Q8TDV0 419 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 ZNF431Q8TF32 576 aaPredicted RBP12.46□□□□□ -0.42
DDX56-206ENST00000446987 FOXJ1Q92949 421 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 TRMT61AQ96FX7 289 aaKnown RBP12.46□□□□□ -0.42
DDX56-206ENST00000446987 WBP1Q96G27 269 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 QRFPRQ96P65 431 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 VAT1Q99536 393 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 CHCHD6Q9BRQ6 235 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.46□□□□□ -0.42
DDX56-206ENST00000446987 GSX2Q9BZM3 304 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 SLC19A3Q9BZV2 496 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 ZDHHC6Q9H6R6 413 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 TMCC3Q9ULS5 477 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 SCML1Q9UN30 329 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 VPS9D1Q9Y2B5 631 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 PCDHGB7Q9Y5F8 929 aa12.46□□□□□ -0.42
DDX56-206ENST00000446987 HK1P19367 917 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 NMBRP28336 390 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 SNRPD1P62314 119 aaKnown RBP12.45□□□□□ -0.42
DDX56-206ENST00000446987 SH3BP2P78314 561 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 HSF2Q03933 536 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 CNTN1Q12860 1018 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 SIM2Q14190 667 aaPredicted RBP12.45□□□□□ -0.42
DDX56-206ENST00000446987 CSHL1Q14406 222 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 SMN1Q16637 294 aaKnown RBP12.45□□□□□ -0.42
DDX56-206ENST00000446987 PDZK1Q5T2W1 519 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 ANKRD34AQ69YU3 496 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 ALG1LQ6GMV1 187 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 PARS2Q7L3T8 475 aaKnown RBP12.45□□□□□ -0.42
DDX56-206ENST00000446987 ZSWIM9Q86XI8 627 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 DNAJC22Q8N4W6 341 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 APH1BQ8WW43 257 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 HRASLS5Q96KN8 279 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 KCNS3Q9BQ31 491 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 RHNO1Q9BSD3 238 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 TRIM8Q9BZR9 551 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 PITHD1Q9GZP4 211 aaPredicted RBP12.45□□□□□ -0.42
DDX56-206ENST00000446987 SPASTQ9UBP0 616 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 ADAM30Q9UKF2 790 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 RIMKLBQ9ULI2 386 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 TP53BP1Q12888 1972 aaPredicted RBP12.45□□□□□ -0.42
DDX56-206ENST00000446987 GON4LQ3T8J9 2241 aa12.45□□□□□ -0.42
DDX56-206ENST00000446987 KCNK1O00180 336 aa12.44□□□□□ -0.42
DDX56-206ENST00000446987 MATN3O15232 486 aa12.44□□□□□ -0.42
DDX56-206ENST00000446987 IGSF6O95976 241 aa12.44□□□□□ -0.42
DDX56-206ENST00000446987 PRNPP04156 253 aa12.44□□□□□ -0.42
DDX56-206ENST00000446987 HLA-DQB2P05538 268 aa12.44□□□□□ -0.42
DDX56-206ENST00000446987 CLEC2LP0C7M8 214 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms