RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 BHLHE41Q9C0J9 482 aaPredicted RBP16.34■□□□□ 0.21
SGCE-206ENST00000445866 GPN2Q9H9Y4 310 aaPredicted RBP16.34■□□□□ 0.21
SGCE-206ENST00000445866 A0A1W2PS29 197 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 CCDC154A6NI56 674 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 TGFBR3LH3BV60 316 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 NR5A2O00482 541 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 PDPK1O15530 556 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 OR10H2O60403 315 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 ALOX12BO75342 701 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 PGRP06401 933 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 EFNA1P20827 205 aaPredicted RBP16.33■□□□□ 0.2
SGCE-206ENST00000445866 MANFP55145 182 aaKnown RBP16.33■□□□□ 0.2
SGCE-206ENST00000445866 PHC1P78364 1004 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 SERTAD2Q14140 314 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 MPEG1Q2M385 716 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 ANXA8L1Q5VT79 327 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 GK5Q6ZS86 529 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 CAMKMTQ7Z624 323 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 FITM2Q8N6M3 262 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 NATD1Q8N6N6 113 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 SPDL1Q96EA4 605 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 ZNF764Q96H86 408 aaPredicted RBP16.33■□□□□ 0.2
SGCE-206ENST00000445866 ZNF681Q96N22 645 aa16.33■□□□□ 0.2
SGCE-206ENST00000445866 PNO1Q9NRX1 252 aaKnown RBP16.33■□□□□ 0.2
SGCE-206ENST00000445866 PRSS51A0A1B0GVH4 220 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 A0A1W2PRB8 838 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 MYO1GB0I1T2 1018 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 TERTO14746 1132 aaKnown RBP16.32■□□□□ 0.2
SGCE-206ENST00000445866 UMODP07911 640 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 SLC35E2P0CK97 266 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 CPMP14384 443 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 TNNI3P19429 210 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 NTSP30990 170 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 EFNA3P52797 238 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 PCBP4P57723 403 aaKnown RBP16.32■□□□□ 0.2
SGCE-206ENST00000445866 SSPNQ14714 243 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 C7orf57Q8NEG2 295 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 ERP27Q96DN0 273 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 ZBED6CLQ96FA7 236 aaPredicted RBP16.32■□□□□ 0.2
SGCE-206ENST00000445866 CCDC86Q9H6F5 360 aaKnown RBP16.32■□□□□ 0.2
SGCE-206ENST00000445866 SEMA3GQ9NS98 782 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 IL17BQ9UHF5 180 aa16.32■□□□□ 0.2
SGCE-206ENST00000445866 IGKV3D-11A0A0A0MRZ8 115 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 A8MUA0 341 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 CFLARO15519 480 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 NCBP2P52298 156 aaKnown RBP eCLIP16.31■□□□□ 0.21e-9■■□□□ 13.4
SGCE-206ENST00000445866 WNT3P56703 355 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 OR4D2P58180 307 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 PLIN5Q00G26 463 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 CYLC2Q14093 348 aaPredicted RBP16.31■□□□□ 0.2
SGCE-206ENST00000445866 RCAN2Q14206 197 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 TIGD2Q4W5G0 525 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 TREML1Q86YW5 311 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 LRRC25Q8N386 305 aaPredicted RBP16.31■□□□□ 0.2
SGCE-206ENST00000445866 AMDHD1Q96NU7 426 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 DGAT2Q96PD7 388 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 PCDHGA6Q9Y5G7 932 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 CLDN16Q9Y5I7 305 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 MRPS18BQ9Y676 258 aaKnown RBP16.31■□□□□ 0.2
SGCE-206ENST00000445866 KIF26BQ2KJY2 2108 aa16.31■□□□□ 0.2
SGCE-206ENST00000445866 TCRBV16S1A1N1A0A5B0 115 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 DYTNA2CJ06 578 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 CAPN14A8MX76 684 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 CPSF4O95639 269 aaKnown RBP16.3■□□□□ 0.2
SGCE-206ENST00000445866 IGHEP01854 428 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 IGLV3-21P80748 117 aaPredicted RBP16.3■□□□□ 0.2
SGCE-206ENST00000445866 DUSP2Q05923 314 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 CLN3Q13286 438 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 MDC1Q14676 2089 aaKnown RBP16.3■□□□□ 0.2
SGCE-206ENST00000445866 TERF2Q15554 542 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 MAPRE2Q15555 327 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 MAPKAPK3Q16644 382 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 LANCL3Q6ZV70 420 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 TRPM8Q7Z2W7 1104 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 ZNF551Q7Z340 670 aaPredicted RBP16.3■□□□□ 0.2
SGCE-206ENST00000445866 ANKRD37Q7Z713 158 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 VASH2Q86V25 355 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 ANKRD46Q86W74 232 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 SNX32Q86XE0 403 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 ST13P4Q8IZP2 240 aaPredicted RBP16.3■□□□□ 0.2
SGCE-206ENST00000445866 TSPEARQ8WU66 669 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 OR5P2Q8WZ92 322 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 CMTM5Q96DZ9 223 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 EFHD1Q9BUP0 239 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 SLC25A23Q9BV35 468 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 GLIPR2Q9H4G4 154 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 RMND5AQ9H871 391 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 SLC52A3Q9NQ40 469 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 ACSS1Q9NUB1 689 aaPredicted RBP16.3■□□□□ 0.2
SGCE-206ENST00000445866 FAM120CQ9NX05 1096 aaKnown RBP16.3■□□□□ 0.2
SGCE-206ENST00000445866 PCDHGB4Q9UN71 923 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 NDUFAF1Q9Y375 327 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 A0A1W2PP18 115 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 RNASET2O00584 256 aaKnown RBP16.3■□□□□ 0.2
SGCE-206ENST00000445866 SCN2BO60939 215 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 CYC1P08574 325 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 COX4I1P13073 169 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 LIFP15018 202 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 CAPN3P20807 821 aa16.3■□□□□ 0.2
SGCE-206ENST00000445866 NT5EP21589 574 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms