RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 POLR2CP19387 275 aaPredicted RBP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 KRT20P35900 424 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 HSD17B2P37059 387 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 RNF144AP50876 292 aaPredicted RBP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 BTN3A2P78410 334 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 ID2Q02363 134 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 FADDQ13158 208 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 C10orf62Q5T681 223 aaPredicted RBP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 TMEM107Q6UX40 140 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 IKBIPQ70UQ0 350 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 AMIGO1Q86WK6 493 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 ERI1Q8IV48 349 aaKnown RBP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 DEFB119Q8N690 84 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 ACOT4Q8N9L9 421 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 PHF10Q8WUB8 498 aaKnown RBP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 RSPO3Q9BXY4 272 aaPredicted RBP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 SERHL2Q9H4I8 314 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 SIRT3Q9NTG7 399 aaPredicted RBP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 CD207Q9UJ71 328 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 DNMT3AQ9Y6K1 912 aaPredicted RBP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 VPS13AQ96RL7 3174 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 SOX14O95416 240 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 RXRGP48443 463 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 GRSF1Q12849 480 aaKnown RBP eCLIP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 SLC9A5Q14940 896 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 ZNF630Q2M218 657 aaPredicted RBP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 PRRT3Q5FWE3 981 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 REEP3Q6NUK4 255 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 Q6ZS52 159 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 UTS2BQ765I0 119 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 ZNF554Q86TJ5 538 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 OR2L8Q8NGY9 312 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 ZBED6CLQ96FA7 236 aaPredicted RBP15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 OR51I1Q9H343 314 aa15.93■□□□□ 0.14
LAPTM4B-201ENST00000445593 A0A1W2PR48 441 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 SLC16A6O15403 523 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 MT-ND2P03891 347 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 GSTT2P0CG29 244 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 GSTT2BP0CG30 244 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 PCSK2P16519 638 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 PPM1FP49593 454 aaPredicted RBP15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 TPMTP51580 245 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 C1orf61Q13536 156 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 CACTIN-AS1Q8N1I8 211 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 OR5P2Q8WZ92 322 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 KAT2AQ92830 837 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 C16orf58Q96GQ5 468 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 APOL4Q9BPW4 351 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 PRR14Q9BWN1 585 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 SRMSQ9H3Y6 488 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 ZNF624Q9P2J8 865 aaPredicted RBP15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 APOBEC3BQ9UH17 382 aaKnown RBP15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 FBXO9Q9UK97 447 aaPredicted RBP15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 SEMA3DO95025 777 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 NR2F1P10589 423 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 ENTPD1P49961 510 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 EMX1Q04741 257 aaPredicted RBP15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 EEF1A2Q05639 463 aaKnown RBP15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 LTB4RQ15722 352 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 THOC7Q6I9Y2 204 aaKnown RBP15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 OR13F1Q8NGS4 319 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 RLN3Q8WXF3 142 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 MS4A6EQ96DS6 147 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 MTERF3Q96E29 417 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 BMFQ96LC9 184 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 QRFPRQ96P65 431 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 GABRG3Q99928 467 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 PADI2Q9Y2J8 665 aa15.92■□□□□ 0.14
LAPTM4B-201ENST00000445593 M0R3H8 397 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 HMGN4O00479 90 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 ADAMDEC1O15204 470 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 ZW10O43264 779 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 JRKO75564 520 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 GADD45GO95257 159 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 CELA2BP08218 269 aaPredicted RBP15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 IGFBP1P08833 259 aaPredicted RBP15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 PUM1Q14671 1186 aaKnown RBP eCLIP15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 TMEM184AQ6ZMB5 413 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 P3H2Q8IVL5 708 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 SETD9Q8NE22 299 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 PROX1Q92786 737 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 NRBF2Q96F24 287 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 C6orf106Q9H6K1 298 aaPredicted RBP15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 SEC14L3Q9UDX4 400 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 DNAJB6O75190 326 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 AIFM1O95831 613 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 IFNW1P05000 195 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 ITGAMP11215 1152 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 LIM2P55344 173 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 MVKQ03426 396 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 LACC1Q8IV20 430 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 TRIM48Q8IWZ4 208 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 AQP11Q8NBQ7 271 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 ADAMTS16Q8TE57 1224 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 CSF3RQ99062 836 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 FUNDC2Q9BWH2 189 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 ROGDIQ9GZN7 287 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 SLC35C2Q9NQQ7 365 aa15.91■□□□□ 0.14
LAPTM4B-201ENST00000445593 TRBV4-1A0A0J9YWV2 114 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms