RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 AGR3Q8TD06 166 aa22.34■■□□□ 1.17
C9orf3-207ENST00000445181 PTPMT1Q8WUK0 201 aaPredicted RBP22.34■■□□□ 1.17
C9orf3-207ENST00000445181 UCN3Q969E3 161 aa22.34■■□□□ 1.17
C9orf3-207ENST00000445181 PPWD1Q96BP3 646 aaKnown RBP22.34■■□□□ 1.17
C9orf3-207ENST00000445181 VMP1Q96GC9 406 aa22.34■■□□□ 1.17
C9orf3-207ENST00000445181 FAIM2Q9BWQ8 316 aa22.34■■□□□ 1.17
C9orf3-207ENST00000445181 CSAG2Q9Y5P2 127 aa22.34■■□□□ 1.17
C9orf3-207ENST00000445181 HECTD1Q9ULT8 2610 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 PGRMC2O15173 223 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 WDPCPO95876 746 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 TRA2BP62995 288 aaKnown RBP22.33■■□□□ 1.17
C9orf3-207ENST00000445181 MPP2Q14168 576 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 CHI3L2Q15782 390 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 HHATQ5VTY9 493 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 KANK2Q63ZY3 851 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 HOMEZQ8IX15 550 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 CISD2Q8N5K1 135 aaKnown RBP22.33■■□□□ 1.17
C9orf3-207ENST00000445181 APCDD1LQ8NCL9 501 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 MORN4Q8NDC4 146 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 TM4SF18Q96CE8 201 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 EBPLQ9BY08 206 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 OR8D2Q9GZM6 311 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.33■■□□□ 1.173e-8■■■□□ 17.2
C9orf3-207ENST00000445181 CDCP1Q9H5V8 836 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 TRAF6Q9Y4K3 522 aa22.33■■□□□ 1.17
C9orf3-207ENST00000445181 C1orf226A1L170 272 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 SLC28A1O00337 649 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 RGS14O43566 566 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 RSL1D1O76021 490 aaKnown RBP22.32■■□□□ 1.16
C9orf3-207ENST00000445181 HSPA4LO95757 839 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 TIA1P31483 386 aaKnown RBP eCLIP22.32■■□□□ 1.16
C9orf3-207ENST00000445181 ALDH9A1P49189 494 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 RAE1P78406 368 aaKnown RBP22.32■■□□□ 1.16
C9orf3-207ENST00000445181 TLR1Q15399 786 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 Q6ZS92 163 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 RPS19BP1Q86WX3 136 aaKnown RBP22.32■■□□□ 1.16
C9orf3-207ENST00000445181 DDIASQ8IXT1 998 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 ST13P4Q8IZP2 240 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-207ENST00000445181 CLYBLQ8N0X4 340 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 BEST3Q8N1M1 668 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 OR4K14Q8NGD5 310 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 SNRNP40Q96DI7 357 aaKnown RBP22.32■■□□□ 1.16
C9orf3-207ENST00000445181 C19orf60Q96EN9 201 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 PELOQ9BRX2 385 aaKnown RBP22.32■■□□□ 1.16
C9orf3-207ENST00000445181 COPS7AQ9UBW8 275 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 PPIEQ9UNP9 301 aaKnown RBP22.32■■□□□ 1.16
C9orf3-207ENST00000445181 PCDHA9Q9Y5H5 950 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 PTGDR2Q9Y5Y4 395 aa22.32■■□□□ 1.16
C9orf3-207ENST00000445181 TMEM120BA0PK00 339 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 TMEM233B4DJY2 109 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 SERPINE1P05121 402 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 FGF4P08620 206 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 ANXA4P09525 319 aaPredicted RBP22.31■■□□□ 1.16
C9orf3-207ENST00000445181 ZNF169Q14929 603 aaPredicted RBP22.31■■□□□ 1.16
C9orf3-207ENST00000445181 HDXQ7Z353 690 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 CATSPER1Q8NEC5 780 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 SLC2A12Q8TD20 617 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 THAP3Q8WTV1 239 aaPredicted RBP22.31■■□□□ 1.16
C9orf3-207ENST00000445181 HAS2Q92819 552 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 PSME2Q9UL46 239 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 DLGAP4Q9Y2H0 992 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 DNAJC15Q9Y5T4 150 aa22.31■■□□□ 1.16
C9orf3-207ENST00000445181 TCP11X1B4DZS4 312 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 SEC22BO75396 215 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 IL3P08700 152 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 LINC00032P0C843 101 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 DHRS4L1P0CG22 281 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 GPR143P51810 404 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 XKP51811 444 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 SLC48A1Q6P1K1 146 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 GALNT18Q6P9A2 607 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 MMP21Q8N119 569 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 LGI4Q8N135 537 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 CDC26Q8NHZ8 85 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 SUN3Q8TAQ9 357 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 MGARPQ8TDB4 240 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 TWIST2Q8WVJ9 160 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 RIT1Q92963 219 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 TLCD1Q96CP7 247 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 NPAS2Q99743 824 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 RNF32Q9H0A6 362 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 ASF1BQ9NVP2 202 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 NKIRAS1Q9NYS0 192 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 POLR3HQ9Y535 204 aaPredicted RBP22.3■■□□□ 1.16
C9orf3-207ENST00000445181 CPAMD8Q8IZJ3 1885 aa22.3■■□□□ 1.16
C9orf3-207ENST00000445181 SHANK1Q9Y566 2161 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 OR5H15A6NDH6 313 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 GABRR3A8MPY1 467 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 TMEM114B3SHH9 223 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 MAN1A2O60476 641 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 ERAL1O75616 437 aaKnown RBP22.29■■□□□ 1.16
C9orf3-207ENST00000445181 ZFAND5O76080 213 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 DDAH2O95865 285 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 SLC35E2P0CK97 266 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 ARRB2P32121 409 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 ST13P50502 369 aaKnown RBP22.29■■□□□ 1.16
C9orf3-207ENST00000445181 NR6A1Q15406 480 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 FHL5Q5TD97 284 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 HSDL2Q6YN16 418 aa22.29■■□□□ 1.16
C9orf3-207ENST00000445181 DGAT2L6Q6ZPD8 337 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms