RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 HMGN4O00479 90 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 BCKDKO14874 412 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 SLC16A6O15403 523 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 EMC8O43402 210 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 UGT2B11O75310 529 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 JRKO75564 520 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 ERAL1O75616 437 aaKnown RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 PGM3O95394 542 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 ATP6V1B1P15313 513 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 ALOX12P18054 663 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 CAPZBP47756 277 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 CRISP3P54108 245 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 GABARAPL2P60520 117 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 RPS26P62854 115 aaKnown RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 SPIBQ01892 262 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 RPL6Q02878 288 aaKnown RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 KCNAB2Q13303 367 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 TOP3AQ13472 1001 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 KEAP1Q14145 624 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 IQCCQ4KMZ1 466 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 RBM48Q5RL73 367 aaKnown RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 RNF220Q5VTB9 566 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 KDM4DQ6B0I6 523 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 NIPAL1Q6NVV3 410 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 FAHD1Q6P587 224 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 BORAQ6PGQ7 559 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 TMEM179BQ7Z7N9 219 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 UBALD2Q8IYN6 164 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 HS3ST5Q8IZT8 346 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 LGI4Q8N135 537 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 SIX5Q8N196 739 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 LRRC25Q8N386 305 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 FAM160A2Q8N612 972 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 CSNK1A1LQ8N752 337 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 KCT2Q8NC54 265 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 PIK3C3Q8NEB9 887 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 FAM46DQ8NEK8 389 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 SUN3Q8TAQ9 357 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 SLC38A5Q8WUX1 472 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 PROX1Q92786 737 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 CLDN23Q96B33 292 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 CNRIP1Q96F85 164 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 MS4A4EQ96PG1 132 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 ZNF300Q96RE9 604 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 MAPKAP1Q9BPZ7 522 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 MACROD1Q9BQ69 325 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 PSD2Q9BQI7 771 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 SPATA5L1Q9BVQ7 753 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 BTBD2Q9BX70 525 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 GRIP2Q9C0E4 1043 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 OR51I1Q9H343 314 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 SEMA6CQ9H3T2 930 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 SYNPO2LQ9H987 977 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 SMURF2Q9HAU4 748 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 EVA1BQ9NVM1 165 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 FAM118AQ9NWS6 357 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 CALML5Q9NZT1 146 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 PDP1Q9P0J1 537 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 ENOPH1Q9UHY7 261 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 TMEFF2Q9UIK5 374 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-206ENST00000441580 RAB23Q9ULC3 237 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 DOLKQ9UPQ8 538 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 ENPP4Q9Y6X5 453 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 HSPE1-MOB4S4R3N1 261 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 U3KQV3 271 aa12.44□□□□□ -0.42
CPSF4-206ENST00000441580 CDH23Q9H251 3354 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 TMEM229AB2RXF0 380 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 H0YGG7 62 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 M0QX08 132 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 TNFRSF11BO00300 401 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 SLC28A2O43868 658 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 PRKRAO75569 313 aaKnown RBP12.43□□□□□ -0.42
CPSF4-206ENST00000441580 SERPINB7O75635 380 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 AGR2O95994 175 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 TFAP2AP05549 437 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 TFPTP0C1Z6 253 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 RRM2P31350 389 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 MAPK10P53779 464 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 CASP9P55211 416 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 ARF3P61204 181 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-206ENST00000441580 HNRNPKP61978 463 aaKnown RBP eCLIP12.43□□□□□ -0.423e-6■■■■□ 21
CPSF4-206ENST00000441580 ZP2Q05996 745 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 ZIK1Q3SY52 487 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-206ENST00000441580 ZNF542PQ5EBM4 170 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 C18orf63Q68DL7 685 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 FBXO42Q6P3S6 717 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 CEP68Q76N32 757 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 CYP4Z1Q86W10 505 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 C19orf47Q8N9M1 422 aaKnown RBP12.43□□□□□ -0.42
CPSF4-206ENST00000441580 ATG16L2Q8NAA4 619 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 ADAMTS18Q8TE60 1221 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 KLHL6Q8WZ60 621 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 HDAC2Q92769 488 aaKnown RBP12.43□□□□□ -0.42
CPSF4-206ENST00000441580 PIP5K1AQ99755 562 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 NPLQ9BXD5 320 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-206ENST00000441580 SERHL2Q9H4I8 314 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 TRIM45Q9H8W5 580 aaPredicted RBP12.43□□□□□ -0.42
CPSF4-206ENST00000441580 BCL2L10Q9HD36 194 aa12.43□□□□□ -0.42
CPSF4-206ENST00000441580 VCX3AQ9NNX9 186 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms