RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PAICSP22234 425 aaKnown RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 CBSP35520 551 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ETV6P41212 452 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 POU6F2P78424 691 aaPredicted RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 RHAGQ02094 409 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 RBBP4Q09028 425 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 GPR17Q13304 367 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ASAH1Q13510 395 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 SPIN4Q56A73 249 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 PRAMEF9Q5VWM5 478 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 RSPO2Q6UXX9 243 aaPredicted RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 ZNF767PQ75MW2 155 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ASB11Q8WXH4 323 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 MYLIPQ8WY64 445 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 SIPA1Q96FS4 1042 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 SLC38A2Q96QD8 506 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 NXF2Q9GZY0 626 aaKnown RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 CDCP1Q9H5V8 836 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 NARFLQ9H6Q4 476 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 KCNK12Q9HB15 430 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 NUDT15Q9NV35 164 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 B4GALT6Q9UBX8 382 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 SLC23A1Q9UHI7 598 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 MBD1Q9UIS9 605 aaPredicted RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 LTBP4Q8N2S1 1624 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ARHGEF33A8MVX0 844 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 NUPL2O15504 423 aaKnown RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 TSPAN6O43657 245 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 CD9P21926 228 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 EVI2BP34910 448 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ETV5P41161 510 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ETV1P50549 477 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 PPP3R1P63098 170 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 LIPJQ5W064 366 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 SMARCD3Q6STE5 483 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 CFAP206Q8IYR0 622 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 CREB3L4Q8TEY5 395 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 SLC25A46Q96AG3 418 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 TMEM19Q96HH6 336 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 PTPN18Q99952 460 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ENAMQ9NRM1 1142 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 HCN2Q9UL51 889 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 PARP14Q460N5 1801 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 PLXNA1Q9UIW2 1896 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 DUSP11O75319 330 aaKnown RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 URODP06132 367 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ADRA2AP08913 450 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ATF6P18850 670 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 CD22P20273 847 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ALAS2P22557 587 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 CRYBB2P43320 205 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 TAS2R41P59536 307 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 MTAPQ13126 283 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ANGPT1Q15389 498 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 FCN2Q15485 313 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 GDPGP1Q6ZNW5 385 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 TPRG1Q6ZUI0 275 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ADGRD2Q7Z7M1 963 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 HOMEZQ8IX15 550 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 REM2Q8IYK8 340 aaPredicted RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 SAMD12Q8N8I0 201 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 SPERTQ8NA61 448 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 UBTD2Q8WUN7 234 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 SMG7Q92540 1137 aaKnown RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 NEIL2Q969S2 332 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 PLD4Q96BZ4 506 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 ZNF607Q96SK3 696 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 RAD9AQ99638 391 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 TTTY10Q9BZA0 68 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 CACYBPQ9HB71 228 aaKnown RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 ACOXLQ9NUZ1 547 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 RBFOX1Q9NWB1 397 aaKnown RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 RDH8Q9NYR8 311 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 BTNL2Q9UIR0 455 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 PPIEQ9UNP9 301 aaKnown RBP8.62□□□□□ -1.03
COPB1-202ENST00000439561 BPTFQ12830 3046 aa8.62□□□□□ -1.03
COPB1-202ENST00000439561 PDCD11Q14690 1871 aaKnown RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 A0A0X1KG70 313 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 CIB4A0PJX0 185 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 PRR23AA6NEV1 266 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 UNCXA6NJT0 531 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 ZAR1LA6NP61 321 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 ANHXE9PGG2 379 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 PRKYO43930 277 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 ADAP00813 363 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 F11P03951 625 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 GJA1P17302 382 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 CDH11P55287 796 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 WNT4P56705 351 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 PFN3P60673 137 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 RRAS2P62070 204 aaPredicted RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 MLLT11Q13015 90 aaPredicted RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 ADAM15Q13444 863 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 INSL4Q14641 139 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 SUZ12Q15022 739 aaKnown RBP8.61□□□□□ -1.03
COPB1-202ENST00000439561 ESCO2Q56NI9 601 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 ALG1LQ6GMV1 187 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 ZNF730Q6ZMV8 503 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 Q6ZVU0 165 aa8.61□□□□□ -1.03
COPB1-202ENST00000439561 TAS1R1Q7RTX1 841 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms