RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 E7ESA3 106 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 HRKO00198 91 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 SAP18O00422 153 aaKnown RBP17.6■□□□□ 0.41
MUC1-211ENST00000438413 SYT5O00445 386 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 TP73O15350 636 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 S100BP04271 92 aaPredicted RBP17.6■□□□□ 0.41
MUC1-211ENST00000438413 BMP5P22003 454 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 PLIN5Q00G26 463 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 BIKQ13323 160 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 E2F2Q14209 437 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 FLYWCH1Q4VC44 716 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 MED27Q6P2C8 311 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 SEM1Q6ZVN7 128 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 LRRC70Q7Z2Q7 622 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 LAS2Q8IYD9 372 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 DND1Q8IYX4 353 aaKnown RBP17.6■□□□□ 0.41
MUC1-211ENST00000438413 ZBED8Q8IZ13 594 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 GOT1L1Q8NHS2 421 aaPredicted RBP17.6■□□□□ 0.41
MUC1-211ENST00000438413 JSRP1Q96MG2 331 aaPredicted RBP17.6■□□□□ 0.41
MUC1-211ENST00000438413 SORBS1Q9BX66 1292 aaKnown RBP17.6■□□□□ 0.41
MUC1-211ENST00000438413 CD244Q9BZW8 370 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 TRIM31Q9BZY9 425 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 RPF2Q9H7B2 306 aaKnown RBP17.6■□□□□ 0.41
MUC1-211ENST00000438413 PROK2Q9HC23 129 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.6■□□□□ 0.41
MUC1-211ENST00000438413 RNF112Q9ULX5 631 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 EDARQ9UNE0 448 aa17.6■□□□□ 0.41
MUC1-211ENST00000438413 CHCHD2Q9Y6H1 151 aaPredicted RBP17.6■□□□□ 0.41
MUC1-211ENST00000438413 ANKHD1Q8IWZ3 2542 aaKnown RBP17.6■□□□□ 0.41
MUC1-211ENST00000438413 MAP1AP78559 2803 aaPredicted RBP17.6■□□□□ 0.41
MUC1-211ENST00000438413 FREM3P0C091 2139 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 NINQ8N4C6 2090 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 A6NNC1 897 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 DVL2O14641 736 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 PROM1O43490 865 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 STMN1P16949 149 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 TCP1P17987 556 aaKnown RBP17.59■□□□□ 0.41
MUC1-211ENST00000438413 CASP2P42575 452 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 TRPC1P48995 793 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 ASCL1P50553 236 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 FOXD4Q12950 439 aaPredicted RBP17.59■□□□□ 0.41
MUC1-211ENST00000438413 SLAMF1Q13291 335 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 KHDRBS2Q5VWX1 349 aaKnown RBP17.59■□□□□ 0.41
MUC1-211ENST00000438413 OR4C11Q6IEV9 310 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 SLC29A4Q7RTT9 530 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 CDC20BQ86Y33 519 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 NAXEQ8NCW5 288 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 OR10G3Q8NGC4 313 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 LRRC46Q96FV0 321 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 CMTM7Q96FZ5 175 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 GAL3ST4Q96RP7 486 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 SH3GL2Q99962 352 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 OR51B5Q9H339 312 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 TRMT1Q9NXH9 659 aaKnown RBP17.59■□□□□ 0.41
MUC1-211ENST00000438413 MS4A12Q9NXJ0 267 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 TXNDC16Q9P2K2 825 aa17.59■□□□□ 0.41
MUC1-211ENST00000438413 NIPBLQ6KC79 2804 aaeCLIP17.58■□□□□ 0.41
MUC1-211ENST00000438413 LRATO95237 230 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 FBXO45P0C2W1 286 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 ALOX15P16050 662 aaPredicted RBP17.58■□□□□ 0.4
MUC1-211ENST00000438413 GDF1P27539 372 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 SERPINB3P29508 390 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 SERPINB1P30740 379 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 HERVK_113P63132 956 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 ERVK-8P63133 956 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 TNFRSF17Q02223 184 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 RNF111Q6ZNA4 994 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 TNIP2Q8NFZ5 429 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 OR7G3Q8NG95 312 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 DOK4Q8TEW6 326 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 CDKL2Q92772 493 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 TANKQ92844 425 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 RNASE6Q93091 150 aaKnown RBP17.58■□□□□ 0.4
MUC1-211ENST00000438413 ALPK1Q96QP1 1244 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 GPR22Q99680 433 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 RBBP8Q99708 897 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 DOHHQ9BU89 302 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 ERVK-6Q9BXR3 956 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 DMRT3Q9NQL9 472 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 PHF11Q9UIL8 331 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 ERVK-19Q9WJR5 959 aa17.58■□□□□ 0.4
MUC1-211ENST00000438413 C15orf38-AP3S2A0A0A6YYH1 394 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 IQANK1A0A1B0GTG1 560 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 CXorf49A8MYA2 514 aaPredicted RBP17.57■□□□□ 0.4
MUC1-211ENST00000438413 PRKRAO75569 313 aaKnown RBP17.57■□□□□ 0.4
MUC1-211ENST00000438413 EPPINO95925 133 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 RAP1GDS1P52306 607 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 DGKQP52824 942 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 DUSP8Q13202 625 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 DDX39BQ13838 428 aaKnown RBP17.57■□□□□ 0.4
MUC1-211ENST00000438413 ZNF267Q14586 743 aaPredicted RBP17.57■□□□□ 0.4
MUC1-211ENST00000438413 SPRED3Q2MJR0 410 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 DEPDC1Q5TB30 811 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 C18orf63Q68DL7 685 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 GPR180Q86V85 440 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 ST13P4Q8IZP2 240 aaPredicted RBP17.57■□□□□ 0.4
MUC1-211ENST00000438413 RNF175Q8N4F7 328 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 FAM222BQ8WU58 562 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 UBXN10Q96LJ8 280 aa17.57■□□□□ 0.4
MUC1-211ENST00000438413 ZNF597Q96LX8 424 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms