RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 CAND1Q86VP6 1230 aaKnown RBP11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 LRRC6Q86X45 466 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 KATNAL2Q8IYT4 538 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 RCOR2Q8IZ40 523 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 FAM47BQ8NA70 645 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 OR5L2Q8NGL0 311 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 OR8K3Q8NH51 312 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SGMS2Q8NHU3 365 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SLC2A12Q8TD20 617 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 SPACA9Q96E40 222 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ZFP3Q96NJ6 502 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 GNRHR2Q96P88 292 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 TNFRSF13CQ96RJ3 184 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 BHLHE41Q9C0J9 482 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 LIPT1Q9Y234 373 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 ALPK2Q86TB3 2170 aa11.15□□□□□ -0.62
SMAD9-IT1-201ENST00000437983 PRR14LQ5THK1 2151 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 MALRD1Q5VYJ5 2156 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 A0A0G2JN53 185 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 FAM234BA2RU67 622 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 C16orf97H3BN30 126 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 UBFD1O14562 309 aaKnown RBP11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 LMX1BO60663 402 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 POU2F1P14859 743 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 MTTPP55157 894 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 HSD17B7P56937 341 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 VLDLRP98155 873 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 RGS1Q08116 209 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CDH17Q12864 832 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 TOMM20Q15388 145 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 SLC18A3Q16572 532 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 PHKG1Q16816 387 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 MPEG1Q2M385 716 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 SPRED3Q2MJR0 410 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 BEX5Q5H9J7 111 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CYHR1Q6ZMK1 362 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 PRELID2Q8N945 189 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 FAM71DQ8N9W8 422 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 MORN4Q8NDC4 146 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 LILRB1Q8NHL6 650 aaPredicted RBP11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 GIMAP7Q8NHV1 300 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 GABPB2Q8TAK5 448 aaPredicted RBP11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 LPGAT1Q92604 370 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 KRT35Q92764 455 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 DAZLQ92904 295 aaKnown RBP11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 GTPBP3Q969Y2 492 aaKnown RBP11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 RHOVQ96L33 236 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 ZNF597Q96LX8 424 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 RUNDC3BQ96NL0 473 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CLK4Q9HAZ1 481 aaKnown RBP11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CHRAC1Q9NRG0 131 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CNIH4Q9P003 139 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CRYL1Q9Y2S2 319 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 TCAF1Q9Y4C2 921 aa11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 MAGED1Q9Y5V3 778 aaPredicted RBP11.14□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 SYCE3A1L190 88 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 ETHE1O95571 254 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 TGM6O95932 706 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 F7P08709 466 aaPredicted RBP11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 NPPBP16860 134 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 DPP4P27487 766 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 PCYT1AP49585 367 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 BTN3A2P78410 334 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 GAB1Q13480 694 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 NAE1Q13564 534 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 STX1AQ16623 288 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 FAM120AOSQ5T036 256 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 YRDCQ86U90 279 aaKnown RBP11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 C9orf40Q8IXQ3 194 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CNEP1R1Q8N9A8 125 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 OR4K1Q8NGD4 311 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 OR8K1Q8NGG5 319 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 ZNF721Q8TF20 911 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 ATL1Q8WXF7 558 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 PGM2Q96G03 612 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 PLPPR2Q96GM1 343 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CSF3RQ99062 836 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 TMEM204Q9BSN7 226 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 C12orf65Q9H3J6 166 aaKnown RBP11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CHODLQ9H9P2 273 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CLCF1Q9UBD9 225 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 MAPRE3Q9UPY8 281 aa11.13□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 TRBC2A0A5B9 178 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 FRG2CA6NGY1 282 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 C17orf105B2RV13 164 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 GOLGA8KD6RF30 607 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 H0Y3Z8 333 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 GOLGA8TH3BQL2 631 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 ZBTB14O43829 449 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 SSX4O60224 188 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 DANCRP0C864 163 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 IGHV4-31P0DP07 118 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CPN1P15169 458 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 ITGA2P17301 1181 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 TNNI3P19429 210 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 KCNJ5P48544 419 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CCR8P51685 355 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 CLCN7P51798 805 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 ZBED6P86452 979 aa11.12□□□□□ -0.63
SMAD9-IT1-201ENST00000437983 FAPQ12884 760 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms