RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 LRRC70Q7Z2Q7 622 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 PRSS42Q7Z5A4 293 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 CLEC14AQ86T13 490 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 EXOC3L1Q86VI1 746 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 THOC6Q86W42 341 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 KMT5CQ86Y97 462 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 PTGR2Q8N8N7 351 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 C19orf47Q8N9M1 422 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 BANPQ8N9N5 519 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 LINC01555Q8NAE3 123 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 OR56A3Q8NH54 315 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 RDH11Q8TC12 318 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 TCP10LQ8TDR4 215 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 SLC5A11Q8WWX8 675 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 PYCR2Q96C36 320 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 RHBDF1Q96CC6 855 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 PHF21BQ96EK2 531 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 CHMP6Q96FZ7 201 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 GPR78Q96P69 363 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 OR2A14Q96R47 310 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 TSC22D3Q99576 134 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 NTMT1Q9BV86 223 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 PINK1Q9BXM7 581 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 KRTAP9-2Q9BYQ4 174 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 SHCBP1LQ9BZQ2 653 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 CD244Q9BZW8 370 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 SPACA1Q9HBV2 294 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 C12orf4Q9NQ89 552 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 SERINC1Q9NRX5 453 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 DDX28Q9NUL7 540 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 NUDT15Q9NV35 164 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 DNAJC11Q9NVH1 559 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 GALNT8Q9NY28 637 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 SPHK1Q9NYA1 384 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 NKIRAS1Q9NYS0 192 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 TMEM9Q9P0T7 183 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 ANKMY1Q9P2S6 941 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 TRPS1Q9UHF7 1281 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 TCFL5Q9UL49 500 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 SNX7Q9UNH6 387 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 GAB2Q9UQC2 676 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 PLLPQ9Y342 182 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 MN1Q10571 1320 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 GPR179Q6PRD1 2367 aa5.88□□□□□ -1.47
ECHDC1-208ENST00000436638 ASCC3Q8N3C0 2202 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 CABIN1Q9Y6J0 2220 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 OTOGLQ3ZCN5 2332 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 KNL1Q8NG31 2342 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 CUL9Q8IWT3 2517 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 A0A087WV62 115 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 CCDC187A0A096LP49 1063 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 A0A1W2PPV9 198 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 EFCAB7A8K855 629 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 A8MT66 165 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 STX16O14662 325 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 HGSO14964 777 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 CASC3O15234 703 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 TM9SF1O15321 606 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PROM1O43490 865 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PLIN3O60664 434 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 SUPT7LO94864 414 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 ZWINTO95229 277 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 TOP3BO95985 862 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 IFNA14P01570 189 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 HPXP02790 462 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 HMGN1P05114 100 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 ANKRD34CP0C6C1 535 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 TMIGD3P0DMS9 266 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PRG2P13727 222 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PVRP15151 417 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 CXCR2P25025 360 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PSMB5P28074 263 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PEBP1P30086 187 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 ETV5P41161 510 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 WNT5AP41221 380 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 ACAA2P42765 397 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 GDF5P43026 501 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 KCNC1P48547 511 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 CCR8P51685 355 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PRKAA2P54646 552 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 CLDN6P56747 220 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 GMFBP60983 142 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 NAA20P61599 178 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PPP1CAP62136 330 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 IRF8Q02556 426 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 CFHR1Q03591 330 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PRDX1Q06830 199 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 ZFP36L1Q07352 338 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 FOXM1Q08050 763 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 TARDBPQ13148 414 aaKnown RBP eCLIP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 EIF3IQ13347 325 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PCBP2Q15366 365 aaKnown RBP eCLIP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PDK4Q16654 411 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 HIST2H2ACQ16777 129 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 C18orf21Q32NC0 220 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 PAGE2BQ5JRK9 111 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 HIST2H2AA3Q6FI13 130 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 JMJD6Q6NYC1 403 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 FIGLAQ6QHK4 219 aa5.87□□□□□ -1.47
ECHDC1-208ENST00000436638 KLHL24Q6TFL4 600 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms