RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MMADHCQ9H3L0 296 aaPredicted RBP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 SPAG4Q9NPE6 437 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 PRTFDC1Q9NRG1 225 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 SLC6A13Q9NSD5 602 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 SLC25A37Q9NYZ2 338 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 PISDQ9UG56 409 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 VPS4AQ9UN37 437 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 NEUROG3Q9Y4Z2 214 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 B4GALT2O60909 372 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 CTNSO60931 367 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 ABCB1P08183 1280 aaPredicted RBP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 SLC6A2P23975 617 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 NCBP2P52298 156 aaKnown RBP eCLIP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 HSD17B7P56937 341 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 NKAIN1Q4KMZ8 207 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 NANOGP8Q6NSW7 305 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 BNC2Q6ZN30 1099 aaPredicted RBP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 ZNF621Q6ZSS3 439 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 COX15Q7KZN9 410 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 ZNF551Q7Z340 670 aaPredicted RBP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 OR4N5Q8IXE1 308 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 MSRB3Q8IXL7 192 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 LRRC25Q8N386 305 aaPredicted RBP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 SUN3Q8TAQ9 357 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 ANKRD9Q96BM1 317 aaPredicted RBP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 RNF31Q96EP0 1072 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 THTPAQ9BU02 230 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 NANOGQ9H9S0 305 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 CDV3Q9UKY7 258 aaKnown RBP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 B3GALT1Q9Y5Z6 326 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 ANKRD65E5RJM6 399 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 NVLO15381 856 aaKnown RBP21.62■■□□□ 1.05
CPSF4-204ENST00000436336 CPMP14384 443 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 ZNF28P17035 718 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 PGM1P36871 562 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 DUSP2Q05923 314 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 HSPB3Q12988 150 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 SLC13A2Q13183 592 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 ERV3-1Q14264 604 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 ZNF750Q32MQ0 723 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 GTDC1Q4AE62 458 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 RUNDC3AQ59EK9 446 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 CCDC116Q8IYX3 515 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 ARHGAP24Q8N264 748 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 TRIML2Q8N7C3 387 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 OR8J3Q8NGG0 315 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 PSMA8Q8TAA3 256 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 CDRT15Q96T59 188 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 DPH2Q9BQC3 489 aaPredicted RBP21.62■■□□□ 1.05
CPSF4-204ENST00000436336 ULBP3Q9BZM4 244 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 LANCL2Q9NS86 450 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 SLC22A11Q9NSA0 550 aa21.62■■□□□ 1.05
CPSF4-204ENST00000436336 A0A1W2PS29 197 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 CFAP73A6NFT4 308 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 MEN1O00255 615 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 CDC123O75794 336 aaPredicted RBP21.61■■□□□ 1.05
CPSF4-204ENST00000436336 BMP10O95393 424 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 PORP16435 677 aaPredicted RBP21.61■■□□□ 1.05
CPSF4-204ENST00000436336 AGXTP21549 392 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 SH3GL1Q99961 368 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 TGIF2Q9GZN2 237 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 CCDC88CQ9P219 2028 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 TMEM181Q9P2C4 612 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 ABCD2Q9UBJ2 740 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 MMACHCQ9Y4U1 282 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 PCDHGA3Q9Y5H0 932 aa21.61■■□□□ 1.05
CPSF4-204ENST00000436336 IGLV3-12A0A075B6K2 115 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 A0A1W2PNU3 283 aaPredicted RBP21.6■■□□□ 1.05
CPSF4-204ENST00000436336 JRKO75564 520 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 ATXN8OSP0DMR3 200 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 SLC7A2P52569 658 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 KCNJ2P63252 427 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 TARDBPQ13148 414 aaKnown RBP eCLIP21.6■■□□□ 1.05
CPSF4-204ENST00000436336 C3orf38Q5JPI3 329 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 ZC3H7AQ8IWR0 971 aaKnown RBP21.6■■□□□ 1.05
CPSF4-204ENST00000436336 SCUBE1Q8IWY4 988 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 SLC15A3Q8IY34 581 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 ADA2Q9NZK5 511 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 KCNK5O95279 499 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 KLK3P07288 261 aaPredicted RBP21.6■■□□□ 1.05
CPSF4-204ENST00000436336 GPC1P35052 558 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 IGLV3-21P80748 117 aaPredicted RBP21.6■■□□□ 1.05
CPSF4-204ENST00000436336 ID2Q02363 134 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 STX4Q12846 297 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 BIKQ13323 160 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 VWA2Q5GFL6 755 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 QSOX2Q6ZRP7 698 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 C7orf57Q8NEG2 295 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 ADAMTS14Q8WXS8 1223 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 TMEM125Q96AQ2 219 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 RAB3IPQ96QF0 476 aaPredicted RBP21.6■■□□□ 1.05
CPSF4-204ENST00000436336 TRIM4Q9C037 500 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 CXorf36Q9H7Y0 433 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 SATB2Q9UPW6 733 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 L3MBTL1Q9Y468 752 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 GMEB1Q9Y692 573 aa21.6■■□□□ 1.05
CPSF4-204ENST00000436336 PMS2P1A4D2B8 440 aa21.59■■□□□ 1.05
CPSF4-204ENST00000436336 NQO1P15559 274 aaKnown RBP21.59■■□□□ 1.05
CPSF4-204ENST00000436336 UQCRC2P22695 453 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms