RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 IL12BP29460 328 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 AKT2P31751 481 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 CXCR5P32302 372 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 GMPRP36959 345 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 HSPA9P38646 679 aaKnown RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 TMED10P49755 219 aaKnown RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 IST1P53990 364 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 AP1S1P61966 158 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 TOP3AQ13472 1001 aaPredicted RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 CA9Q16790 459 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 EXOC3L4Q17RC7 722 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 RSPO4Q2I0M5 234 aaPredicted RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 ANKRD55Q3KP44 614 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 USP41Q3LFD5 358 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 GXYLT1Q4G148 440 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 IQCCQ4KMZ1 466 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 PRAMEF5Q5TYX0 476 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 GPR157Q5UAW9 335 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 PRAMEF9Q5VWM5 478 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 PRAMEF6Q5VXH4 476 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 SLC9A4Q6AI14 798 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 DGAT2L7PQ6IED9 249 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 TMEM220Q6QAJ8 160 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 FAM151BQ6UXP7 276 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 EIF3MQ7L2H7 374 aaKnown RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 ZNF571Q7Z3V5 609 aaPredicted RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 PAQR7Q86WK9 346 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 SFR1Q86XK3 245 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 ZNF280BQ86YH2 543 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 CCDC28AQ8IWP9 274 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 PPIL6Q8IXY8 311 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 KBTBD2Q8IY47 623 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 LRRC17Q8N6Y2 441 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 RNF148Q8N7C7 305 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 DDHD1Q8NEL9 900 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 NUDT10Q8NFP7 164 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 C9orf43Q8TAL5 461 aaPredicted RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 IRF7Q92985 503 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 SLC35C1Q96A29 364 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 C16orf58Q96GQ5 468 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 MARS2Q96GW9 593 aaKnown RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 SLITRK1Q96PX8 696 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 CTRCQ99895 268 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 SYT11Q9BT88 431 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 POLDIP3Q9BY77 421 aaKnown RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 MAGT1Q9H0U3 335 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 ALX4Q9H161 411 aaPredicted RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 IPPKQ9H8X2 491 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 GP6Q9HCN6 339 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 MYOZ1Q9NP98 299 aaPredicted RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 FAM105AQ9NUU6 356 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 FAIMQ9NVQ4 179 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 GFOD1Q9NXC2 390 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 DLL3Q9NYJ7 618 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 STOML1Q9UBI4 398 aa5.26□□□□□ -1.57
RFC3-202ENST00000434425 AGO1Q9UL18 857 aaKnown RBP5.26□□□□□ -1.57
RFC3-202ENST00000434425 SDK1Q7Z5N4 2213 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 TEX13CA0A0J9YWL9 993 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 FAM90A7PA6NKC0 464 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 FAM90A22PA8MWA6 464 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 KIAA1324LA8MWY0 1029 aaPredicted RBP5.25□□□□□ -1.57
RFC3-202ENST00000434425 FAM90A12PA8MX19 464 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 A8MXQ7 604 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 FAM90A23PA8MXZ1 464 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 H7C4K7 107 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 TOR1AO14656 332 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 SLC22A1O15245 554 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 TMPRSS2O15393 492 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 RNF13O43567 381 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 AKAP8O43823 692 aaKnown RBP5.25□□□□□ -1.57
RFC3-202ENST00000434425 DFNA5O60443 496 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 TRIM13O60858 407 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 HSF2BPO75031 334 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 BCAS1O75363 584 aaPredicted RBP5.25□□□□□ -1.57
RFC3-202ENST00000434425 GMNNO75496 209 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 NXPH2O95156 264 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 VAMP5O95183 116 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 STBD1O95210 358 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 NADKO95544 446 aaPredicted RBP5.25□□□□□ -1.57
RFC3-202ENST00000434425 ZBTB11O95625 1053 aaPredicted RBP5.25□□□□□ -1.57
RFC3-202ENST00000434425 PIGRP01833 764 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 CFIP05156 583 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 C1SP09871 688 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 H2AFZP0C0S5 128 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 TMEM253P0C7T8 217 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 SPATA31D3P0C874 917 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 CD19P15391 556 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 KRT15P19012 456 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 HNF1AP20823 631 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 ATP6V1C1P21283 382 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 TIA1P31483 386 aaKnown RBP eCLIP5.25□□□□□ -1.579e-9■■■■■ 29.6
RFC3-202ENST00000434425 NTF4P34130 210 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 ARRB1P49407 418 aaPredicted RBP5.25□□□□□ -1.57
RFC3-202ENST00000434425 CDK9P50750 372 aaKnown RBP5.25□□□□□ -1.57
RFC3-202ENST00000434425 RAD23BP54727 409 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 CDH15P55291 814 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 DCDC1P59894 354 aa5.25□□□□□ -1.57
RFC3-202ENST00000434425 SNRPFP62306 86 aaKnown RBP5.25□□□□□ -1.57
RFC3-202ENST00000434425 MTAPQ13126 283 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms