RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CACNA1IQ9P0X4 2223 aa15.75■□□□□ 0.11
USHBP1-203ENST00000431146 PRAMEF25A6NGN4 478 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 NME6O75414 186 aaPredicted RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 CTSBP07858 339 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 NME1P15531 152 aaKnown RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 PIGAP37287 484 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 TSFMP43897 325 aaKnown RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 RACK1P63244 317 aaKnown RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 TMEM107Q6UX40 140 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 OLIG3Q7RTU3 272 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 GALNT5Q7Z7M9 940 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 OOSP2Q86WS3 158 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 PJA1Q8NG27 643 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 KLHL6Q8WZ60 621 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 RERGQ96A58 199 aaPredicted RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 RMND5BQ96G75 393 aaPredicted RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 MUS81Q96NY9 551 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 MBOAT4Q96T53 435 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 CSF3RQ99062 836 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 CHRDQ9H2X0 955 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 DOLKQ9UPQ8 538 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 ENTPD4Q9Y227 616 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 ANGPT4Q9Y264 503 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 SAMHD1Q9Y3Z3 626 aaKnown RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 THADAQ6YHU6 1953 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 FAM221BA6H8Z2 402 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 H3BNH8 94 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 MITFO75030 526 aaPredicted RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 H6PDO95479 791 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 OR12D1P0DN82 309 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 NR2F6P10588 404 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 ST6GAL1P15907 406 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 HOXB6P17509 224 aaKnown RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 ARFIP1P53367 373 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 CDH15P55291 814 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 PCBP3P57721 371 aaKnown RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 DMWDQ09019 674 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 FOXD4Q12950 439 aaPredicted RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 RUNX2Q13950 521 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 MYBPC3Q14896 1274 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 MLC1Q15049 377 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 SHQ1Q6PI26 577 aaKnown RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 TTC33Q6PID6 262 aaPredicted RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 CCDC80Q76M96 950 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 SATL1Q86VE3 508 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 CADM4Q8NFZ8 388 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 PSMA8Q8TAA3 256 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 MIPOL1Q8TD10 442 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 TMEM19Q96HH6 336 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 NELL2Q99435 816 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 AMBRA1Q9C0C7 1298 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 OR51I1Q9H343 314 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 RUBCNLQ9H714 662 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 IL21RQ9HBE5 538 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 FAM60AQ9NP50 221 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 TRPC4Q9UBN4 977 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 TMEFF2Q9UIK5 374 aaPredicted RBP15.74■□□□□ 0.11
USHBP1-203ENST00000431146 MYRFQ9Y2G1 1151 aa15.74■□□□□ 0.11
USHBP1-203ENST00000431146 TP53BP1Q12888 1972 aaPredicted RBP15.73■□□□□ 0.11
USHBP1-203ENST00000431146 CLPTM1O96005 669 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 HPRP00739 348 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 SMIM10L1P0DMW3 83 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 POLR2IP36954 125 aaKnown RBP15.73■□□□□ 0.11
USHBP1-203ENST00000431146 CSNK1EP49674 416 aaKnown RBP15.73■□□□□ 0.11
USHBP1-203ENST00000431146 ITGA1P56199 1179 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 VSX2P58304 361 aaPredicted RBP15.73■□□□□ 0.11
USHBP1-203ENST00000431146 IL1RL1Q01638 556 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 SUZ12Q15022 739 aaKnown RBP15.73■□□□□ 0.11
USHBP1-203ENST00000431146 ELOCQ15369 112 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 LTB4RQ15722 352 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 MAPK11Q15759 364 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 DEFB133Q30KQ1 61 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 CRB2Q5IJ48 1285 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 REEP3Q6NUK4 255 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 ARMC6Q6NXE6 501 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 ARHGAP22Q7Z5H3 698 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 HIPK1Q86Z02 1210 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 OR4N5Q8IXE1 308 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 ARL14Q8N4G2 192 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 ARL10Q8N8L6 244 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 CAMKVQ8NCB2 501 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 OR9A2Q8NGT5 310 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 XAGE5Q8WWM1 108 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 SMIM10Q96HG1 83 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 SLC35G5Q96KT7 338 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 CD320Q9NPF0 282 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 LYARQ9NX58 379 aaKnown RBP15.73■□□□□ 0.11
USHBP1-203ENST00000431146 SH3GLB1Q9Y371 365 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 TESMINQ9Y4I5 508 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 DMDP11532 3685 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 PCDH15Q96QU1 1955 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 PRAMEF27A3QJZ7 478 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 C5orf58C9J3I9 102 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 TFAP2AP05549 437 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 CPN2P22792 545 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 RRM2P31350 389 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 RGS19P49795 217 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 LIM2P55344 173 aa15.73■□□□□ 0.11
USHBP1-203ENST00000431146 SIM1P81133 766 aaPredicted RBP15.73■□□□□ 0.11
USHBP1-203ENST00000431146 KCNAB2Q13303 367 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms