RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 PCM1Q15154 2024 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 LCTP09848 1927 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 I3L521 148 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 UGT2B10P36537 528 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 IFNGR2P38484 337 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 TATDN3Q17R31 274 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 PRAMEF14Q5SWL7 426 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 PRAMEF13Q5VWM6 474 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 RAB42Q8N4Z0 105 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 SLC5A11Q8WWX8 675 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 CNIH4Q9P003 139 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 CCDC59Q9P031 241 aaKnown RBP13.1□□□□□ -0.31
SGMS1-203ENST00000429490 ZFR2Q9UPR6 939 aaKnown RBP13.1□□□□□ -0.31
SGMS1-203ENST00000429490 CAPN5O15484 640 aaPredicted RBP13.09□□□□□ -0.31
SGMS1-203ENST00000429490 LRRTM2O43300 516 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 OSMP13725 252 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 MAGEA2P43356 314 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 NCBP2P52298 156 aaKnown RBP eCLIP13.09□□□□□ -0.312e-10■■■■□ 21.3
SGMS1-203ENST00000429490 CNIH2Q6PI25 160 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 OR6C4Q8NGE1 309 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 OR51G2Q8NGK0 314 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 AIF1LQ9BQI0 150 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 ZNF224Q9NZL3 707 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 GRIP1Q9Y3R0 1128 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 TRBV23OR9-2A0A075B6M9 112 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 FAM170BA6NMN3 283 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 QSOX1O00391 747 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 SEMA3DO95025 777 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 DHFRP00374 187 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 FCER2P06734 321 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 C1GALT1C1LP0DN25 315 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 PRG2P13727 222 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 HOXD10P28358 340 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 MTFR2Q6P444 385 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 METTL3Q86U44 580 aaKnown RBP13.09□□□□□ -0.31
SGMS1-203ENST00000429490 PEX5LQ8IYB4 626 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 YIPF7Q8N8F6 280 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 L3MBTL4Q8NA19 623 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 DEDD2Q8WXF8 326 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 C7orf34Q96L11 122 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 C17orf62Q9BQA9 187 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 HMX1Q9NP08 348 aaPredicted RBP13.09□□□□□ -0.31
SGMS1-203ENST00000429490 MCUBQ9NWR8 336 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 INSL5Q9Y5Q6 135 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 WNT6Q9Y6F9 365 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 CD160O95971 181 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 WASP42768 502 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 SLC3A1Q07837 685 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 FCHO2Q0JRZ9 810 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 MBTPS1Q14703 1052 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 KLHL22Q53GT1 634 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 FAHD1Q6P587 224 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 C17orf99Q6UX52 265 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 ZNF438Q7Z4V0 828 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 PDZD3Q86UT5 571 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 VWA5B2Q8N398 1253 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 SYNPOQ8N3V7 929 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 LINC01599Q8WXQ3 324 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 KLK6Q92876 244 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 ZBED6CLQ96FA7 236 aaPredicted RBP13.09□□□□□ -0.31
SGMS1-203ENST00000429490 CXXC1Q9P0U4 656 aaPredicted RBP13.09□□□□□ -0.31
SGMS1-203ENST00000429490 EXTL2Q9UBQ6 330 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 MGAT4BQ9UQ53 548 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 KLK4Q9Y5K2 254 aa13.09□□□□□ -0.31
SGMS1-203ENST00000429490 HPGDSO60760 199 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 PRAMEF4O60810 478 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 RAB36O95755 333 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 CD22P20273 847 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 UQCRC1P31930 480 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 SLC9A3P48764 834 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 ANXA11P50995 505 aaKnown RBP13.08□□□□□ -0.31
SGMS1-203ENST00000429490 RBBP4Q09028 425 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 LARS2Q15031 903 aaKnown RBP13.08□□□□□ -0.31
SGMS1-203ENST00000429490 PRAMEF9Q5VWM5 478 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 ALG1LQ6GMV1 187 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 GRHL2Q6ISB3 625 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 PRR23CQ6ZRP0 262 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 SLC30A8Q8IWU4 369 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 ZNF480Q8WV37 535 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 GLYATL1Q969I3 302 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 CLSTN3Q9BQT9 956 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 QRSL1Q9H0R6 528 aaKnown RBP13.08□□□□□ -0.31
SGMS1-203ENST00000429490 ACER3Q9NUN7 267 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 PCDHGA2Q9Y5H1 932 aa13.08□□□□□ -0.31
SGMS1-203ENST00000429490 TRBV5-3A0A0A0MS03 114 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 PGRMC2O15173 223 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 PI15O43692 258 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 GPR37L1O60883 481 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 CSO75390 466 aaKnown RBP13.08□□□□□ -0.32
SGMS1-203ENST00000429490 EPHX1P07099 455 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 C8AP07357 584 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 BMP7P18075 431 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 ABATP80404 500 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 B4GALNT1Q00973 533 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 SP140Q13342 867 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 SYPL1Q16563 259 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 LY6G5CQ5SRR4 150 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 ZDHHC20Q5W0Z9 365 aa13.08□□□□□ -0.32
SGMS1-203ENST00000429490 FAM124AQ86V42 546 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms