RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 RNF112Q9ULX5 631 aa15.23■□□□□ 0.03
VARS-216ENST00000428445 GLOD5A6NK44 160 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 EFCAB8A8MWE9 144 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 KLK2P20151 261 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 PAFAH1B1P43034 410 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 HNRNPH2P55795 449 aaKnown RBP15.22■□□□□ 0.03
VARS-216ENST00000428445 ATP6V0D1P61421 351 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 HERVK_113P63132 956 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 ERVK-8P63133 956 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 IGLV3-21P80748 117 aaPredicted RBP15.22■□□□□ 0.03
VARS-216ENST00000428445 BIKQ13323 160 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 ZNF267Q14586 743 aaPredicted RBP15.22■□□□□ 0.03
VARS-216ENST00000428445 BICRALQ6AI39 1079 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 OR4C11Q6IEV9 310 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 ULK2Q8IYT8 1036 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 PDPRQ8NCN5 879 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 TNIP2Q8NFZ5 429 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 OR7G3Q8NG95 312 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 PAQR8Q8TEZ7 354 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 SPACA9Q96E40 222 aaPredicted RBP15.22■□□□□ 0.03
VARS-216ENST00000428445 FOXC2Q99958 501 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 ERVK-6Q9BXR3 956 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 PHACTR1Q9C0D0 580 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 CXXC4Q9H2H0 198 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 ALG9Q9H6U8 611 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 RPF2Q9H7B2 306 aaKnown RBP15.22■□□□□ 0.03
VARS-216ENST00000428445 ZFP64Q9NPA5 681 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 ERVK-19Q9WJR5 959 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 SAR1BQ9Y6B6 198 aa15.22■□□□□ 0.03
VARS-216ENST00000428445 A0A1W2PS29 197 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 UBXN8O00124 270 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 PROM1O43490 865 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 HCN1O60741 890 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 BMP5P22003 454 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 AGFG1P52594 562 aaKnown RBP15.21■□□□□ 0.03
VARS-216ENST00000428445 TBCCQ15814 346 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 SLC25A35Q3KQZ1 300 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 PAGE2BQ5JRK9 111 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 RIPPLY2Q5TAB7 128 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 DEPDC1Q5TB30 811 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 KHDRBS2Q5VWX1 349 aaKnown RBP15.21■□□□□ 0.03
VARS-216ENST00000428445 MED27Q6P2C8 311 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 LAS2Q8IYD9 372 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 NEIL3Q8TAT5 605 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 NUBPLQ8TB37 319 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 SLC22A8Q8TCC7 542 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 CDKL2Q92772 493 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 RBM18Q96H35 190 aaKnown RBP15.21■□□□□ 0.03
VARS-216ENST00000428445 UBXN10Q96LJ8 280 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 CLEC4MQ9H2X3 399 aaPredicted RBP15.21■□□□□ 0.03
VARS-216ENST00000428445 SAYSD1Q9NPB0 183 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 RASSF1Q9NS23 344 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 CNOT11Q9UKZ1 510 aaKnown RBP15.21■□□□□ 0.03
VARS-216ENST00000428445 CHCHD2Q9Y6H1 151 aaPredicted RBP15.21■□□□□ 0.03
VARS-216ENST00000428445 SPACA6W5XKT8 324 aa15.21■□□□□ 0.03
VARS-216ENST00000428445 MED12Q93074 2177 aa15.21■□□□□ 0.02
VARS-216ENST00000428445 LRRC14BA6NHZ5 514 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 SYT5O00445 386 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 PLPP1O14494 284 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 EIF3HO15372 352 aaKnown RBP eCLIP15.2■□□□□ 0.02
VARS-216ENST00000428445 SCELO95171 688 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 ACSL3O95573 720 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 CLPSP04118 112 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 S100BP04271 92 aaPredicted RBP15.2■□□□□ 0.02
VARS-216ENST00000428445 COX7A2P14406 83 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 STMN1P16949 149 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 CASP2P42575 452 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 FOXD4Q12950 439 aaPredicted RBP15.2■□□□□ 0.02
VARS-216ENST00000428445 DUSP8Q13202 625 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 KRTAP21-3Q3LHN1 58 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 TMEM35AQ53FP2 167 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 CHSY3Q70JA7 882 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 CMC1Q7Z7K0 106 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 ISCA2Q86U28 154 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 GPR180Q86V85 440 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 CDC20BQ86Y33 519 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 MMP21Q8N119 569 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 LRRC25Q8N386 305 aaPredicted RBP15.2■□□□□ 0.02
VARS-216ENST00000428445 FBXW8Q8N3Y1 598 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 MYRIPQ8NFW9 859 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 HUS1BQ8NHY5 278 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 PYROXD1Q8WU10 500 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 MTERF1Q99551 399 aaKnown RBP15.2■□□□□ 0.02
VARS-216ENST00000428445 GPR22Q99680 433 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 RBBP8Q99708 897 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 DPH5Q9H2P9 285 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 EPB41L4BQ9H329 900 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 KCNF1Q9H3M0 494 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 TXNDC16Q9P2K2 825 aa15.2■□□□□ 0.02
VARS-216ENST00000428445 BOKQ9UMX3 212 aaPredicted RBP15.2■□□□□ 0.02
VARS-216ENST00000428445 C15orf38-AP3S2A0A0A6YYH1 394 aa15.19■□□□□ 0.02
VARS-216ENST00000428445 IQANK1A0A1B0GTG1 560 aa15.19■□□□□ 0.02
VARS-216ENST00000428445 FAM221AA4D161 298 aa15.19■□□□□ 0.02
VARS-216ENST00000428445 SUPT3HB4E1H0 165 aa15.19■□□□□ 0.02
VARS-216ENST00000428445 SUPT3HO75486 399 aa15.19■□□□□ 0.02
VARS-216ENST00000428445 EEDO75530 441 aaKnown RBP15.19■□□□□ 0.02
VARS-216ENST00000428445 C1QAP02745 245 aa15.19■□□□□ 0.02
VARS-216ENST00000428445 GSTA2P09210 222 aa15.19■□□□□ 0.02
VARS-216ENST00000428445 FBXO45P0C2W1 286 aa15.19■□□□□ 0.02
VARS-216ENST00000428445 GABRA1P14867 456 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms