RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 GRIN2CQ14957 1233 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 UBXN2BQ14CS0 331 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 PEA15Q15121 130 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MPPED2Q15777 294 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 STXBP2Q15833 593 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 NDUFA9Q16795 377 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MPEG1Q2M385 716 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TKFCQ3LXA3 575 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF528Q3MIS6 628 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC25A52Q3SY17 297 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZRANB3Q5FWF4 1079 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TMEM201Q5SNT2 666 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 C6orf136Q5SQH8 315 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 LRIF1Q5T3J3 769 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 FAM171A1Q5VUB5 890 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 AADACL4Q5VUY2 407 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 PRAMEF13Q5VWM6 474 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF772Q68DY9 489 aaPredicted RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 EIF5AL1Q6IS14 154 aaKnown RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 KIAA1211LQ6NV74 962 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 LINGO4Q6UY18 593 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ETV3LQ6ZN32 361 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 FAM196AQ6ZSG2 479 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TMPRSS11FQ6ZWK6 438 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 WDR53Q7Z5U6 358 aaPredicted RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SLC51AQ86UW1 340 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TPRA1Q86W33 373 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 CALHM3Q86XJ0 350 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 CEP97Q8IW35 865 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 KIAA0319LQ8IZA0 1049 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 C11orf65Q8NCR3 313 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 GPR26Q8NDV2 337 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 THAP6Q8TBB0 222 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 PROKR1Q8TCW9 393 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 APH1BQ8WW43 257 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TFAP2BQ92481 460 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 NR4A3Q92570 626 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 NELL1Q92832 810 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 NTAN1Q96AB6 310 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF837Q96EG3 531 aaPredicted RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ELMOD3Q96FG2 381 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MYO19Q96H55 970 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF354BQ96LW1 612 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TEFMQ96QE5 360 aaKnown RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 FCRL5Q96RD9 977 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 LGMNQ99538 433 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SOSTQ9BQB4 213 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 CCM2Q9BSQ5 444 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MRI1Q9BV20 369 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 RIOK2Q9BVS4 552 aaKnown RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TINAGL1Q9GZM7 467 aaPredicted RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 DERL2Q9GZP9 239 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MFSD1Q9H3U5 465 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ALG9Q9H6U8 611 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 EVA1AQ9H8M9 152 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 RNF122Q9H9V4 155 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ATP13A1Q9HD20 1204 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SMCO4Q9NRQ5 59 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 NUDT15Q9NV35 164 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 PIH1D1Q9NWS0 290 aaKnown RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TXNL4BQ9NX01 149 aaKnown RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 GPR83Q9NYM4 423 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 TAS2R13Q9NYV9 303 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 WRAP73Q9P2S5 460 aaPredicted RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 MIOXQ9UGB7 285 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 HACL1Q9UJ83 578 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 ZNF112Q9UJU3 913 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 PCOLCE2Q9UKZ9 415 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SCML1Q9UN30 329 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 KCNIP3Q9Y2W7 256 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 DYRK1BQ9Y463 629 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 BACE2Q9Y5Z0 518 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 UBIAD1Q9Y5Z9 338 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 COL2A1P02458 1487 aaPredicted RBP5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 LTBP4Q8N2S1 1624 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 LY75O60449 1722 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SHANK3Q9BYB0 1731 aa5.36□□□□□ -1.55
VTI1BP4-201ENST00000427516 SIP14410 1827 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 LOC102723532A0A0G2JNH3 316 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 TRDV1A0A1B0GX56 115 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 A0A1W2PRB8 838 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ASPDHA6ND91 283 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ANKRD61A6NGH8 418 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 LRRN3E7EW58 273 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 NEDD8-MDP1E9PL57 170 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 J3KR12 359 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 B4GALT5O43286 388 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 LRRTM2O43300 516 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 EFCAB14O75071 495 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 EIF3GO75821 320 aaKnown RBP eCLIP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 GADD45GO95257 159 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SIX3O95343 332 aaPredicted RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 MPC2O95563 127 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 F10P00742 488 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ADAP00813 363 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 TFP02787 698 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SRPRAP08240 638 aaKnown RBP5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 SPARCP09486 303 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 ARP10275 920 aa5.35□□□□□ -1.55
VTI1BP4-201ENST00000427516 CKBP12277 381 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms