RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 IDH3GP51553 393 aaPredicted RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 FAM69AQ5T7M9 428 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 MBLAC2Q68D91 279 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 OR6N2Q8NGY6 317 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 NTPCRQ9BSD7 190 aaKnown RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF696Q9H7X3 374 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 TAC3Q9UHF0 121 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 PCYT1BQ9Y5K3 369 aaPredicted RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 SEC14L2O76054 403 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 TGM6O95932 706 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ALPIP09923 528 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 NUDT6P53370 316 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 RSU1Q15404 277 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 TMEM35AQ53FP2 167 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 PGAP1Q75T13 922 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 KIAA0907Q7Z7F0 614 aaPredicted RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 PLD6Q8N2A8 252 aaKnown RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 OR4F6Q8NGB9 312 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 LRCH3Q96II8 777 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 FBXO7Q9Y3I1 522 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 LGR5O75473 907 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 CHATP28329 748 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 CLCNKAP51800 687 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 RPS3AP61247 264 aaKnown RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ERVK-16P61578 105 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 GPR139Q6DWJ6 353 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ARMC1Q9NVT9 282 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 GLTPQ9NZD2 209 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 CLEC4EQ9ULY5 219 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 COQ4Q9Y3A0 265 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 TOR1AO14656 332 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 GMDSO60547 372 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 C8AP07357 584 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 SUOXP51687 545 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 HSD17B7P56937 341 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 MPP7Q5T2T1 576 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 C2CD4AQ8NCU7 369 aaPredicted RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 OR9A4Q8NGU2 314 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 NELL2Q99435 816 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ABCG5Q9H222 651 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ZFR2Q9UPR6 939 aaKnown RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 TRBV2A0A0J9YWF9 115 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 A8MVJ9 347 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 AIPO00170 330 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 FOXN2P32314 431 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 HK3P52790 923 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 RAB4BP61018 213 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 GALK2Q01415 458 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 CMPK2Q5EBM0 449 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 MLIPQ5VWP3 458 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ENPP7Q6UWV6 458 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 OR5L2Q8NGL0 311 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 DAZLQ92904 295 aaKnown RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ZDHHC18Q9NUE0 388 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 TCRBV7S2A1N4TA0A589 114 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 KCNJ13O60928 360 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 RFPL2O75678 378 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ARRB1P49407 418 aaPredicted RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 BLOC1S1P78537 153 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF33BQ06732 778 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ELOAQ14241 798 aaKnown RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 MEF2DQ14814 521 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 UGT8Q16880 541 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 CLVS2Q5SYC1 327 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 LIPKQ5VXJ0 399 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 KCNIP4Q6PIL6 250 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 TPRG1Q6ZUI0 275 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 TMPRSS12Q86WS5 348 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 GLYATL2Q8WU03 294 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 AUTS2Q8WXX7 1259 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 XPNPEP1Q9NQW7 623 aa13.87□□□□□ -0.19
PTPN13-203ENST00000427191 TIMM8BQ9Y5J9 83 aaPredicted RBP13.87□□□□□ -0.19
PTPN13-203ENST00000427191 ATXN7L3Q14CW9 347 aaPredicted RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 RNASE10Q5GAN6 216 aaKnown RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 WDR45BQ5MNZ6 344 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 RAB7BQ96AH8 199 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF578Q96N58 590 aaPredicted RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 RDH16O75452 317 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 CD48P09326 243 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 CCDC58Q4VC31 144 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 MCHR1Q99705 422 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 ABCC6O95255 1503 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 C2orf74A8MZ97 194 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 SNAPINO95295 136 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 SNHG28P0DPA3 235 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 ACP5P13686 325 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 ZNF43P17038 809 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 CELP19835 753 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 TRIM46Q7Z4K8 759 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 TPT1P13693 172 aaKnown RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 CASP7P55210 303 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 HMGCS1Q01581 520 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 TRMT10BQ6PF06 316 aaKnown RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 JPH3Q8WXH2 748 aaPredicted RBP13.86□□□□□ -0.19
PTPN13-203ENST00000427191 GNG13Q9P2W3 67 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 NUBP2Q9Y5Y2 271 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 JRKO75564 520 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 G6PDP11413 515 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 AMZ1Q400G9 498 aa13.86□□□□□ -0.19
PTPN13-203ENST00000427191 AGTRAPQ6RW13 159 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms