RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 CHDHQ8NE62 594 aaPredicted RBP2.06□□□□□ -2.08
LINC02541-201ENST00000427157 OR4F5Q8NH21 305 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 SNRNP27Q8WVK2 155 aaKnown RBP2.06□□□□□ -2.08
LINC02541-201ENST00000427157 CRYGNQ8WXF5 182 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 MRPL24Q96A35 216 aaKnown RBP2.06□□□□□ -2.08
LINC02541-201ENST00000427157 VPS33AQ96AX1 596 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 C16orf58Q96GQ5 468 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 C16orf74Q96GX8 76 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 RAB40CQ96S21 281 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 KIR2DL4Q99706 377 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 ST6GALNAC5Q9BVH7 336 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 WWP1Q9H0M0 922 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 TAS2R16Q9NYV7 291 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 EIF3KQ9UBQ5 218 aaKnown RBP2.06□□□□□ -2.08
LINC02541-201ENST00000427157 PFASO15067 1338 aa2.06□□□□□ -2.08
LINC02541-201ENST00000427157 SLC15A5A6NIM6 579 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 CCSO14618 274 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 TBX10O75333 385 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 FOXH1O75593 365 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 HSPB1P04792 205 aaKnown RBP2.05□□□□□ -2.08
LINC02541-201ENST00000427157 CCDC175P0C221 793 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 PDGFRAP16234 1089 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 IL2RGP31785 369 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 NAGLUP54802 743 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 MFAP2P55001 183 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 CDO1Q16878 200 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 TCP11X2Q5H9J9 407 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 ACER2Q5QJU3 275 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 SHEQ5VZ18 495 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 FAM91A1Q658Y4 838 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 PM20D1Q6GTS8 502 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 IRGCQ6NXR0 463 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 SCARA5Q6ZMJ2 495 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 ANKRD46Q86W74 232 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 ICA1LQ8NDH6 482 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 ZNF721Q8TF20 911 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 TCP11Q8WWU5 503 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 PNPLA2Q96AD5 504 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 SIPA1Q96FS4 1042 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 INPP5KQ9BT40 448 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 SCRT1Q9BWW7 348 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 NEU3Q9UQ49 428 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 CA5BQ9Y2D0 317 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 CDC42BPBQ9Y5S2 1711 aa2.05□□□□□ -2.08
LINC02541-201ENST00000427157 C5orf52A6NGY3 159 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 TRIM49D1C9J1S8 452 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 MAGEB4O15481 346 aaPredicted RBP2.04□□□□□ -2.08
LINC02541-201ENST00000427157 EMC8O43402 210 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 KIAA0513O60268 411 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 GBAP04062 536 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 GLRA1P23415 457 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 FOLH1Q04609 750 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 DCAF12Q5T6F0 453 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 ZNF658Q5TYW1 1059 aaPredicted RBP2.04□□□□□ -2.08
LINC02541-201ENST00000427157 CAPN13Q6MZZ7 669 aaPredicted RBP2.04□□□□□ -2.08
LINC02541-201ENST00000427157 CFAP161Q6P656 301 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 OTOAQ7RTW8 1153 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 TIGD4Q8IY51 512 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 PCED1BQ96HM7 432 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 FER1L6-AS2Q96M78 137 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 SERINC2Q96SA4 455 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 SEC14L4Q9UDX3 406 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 CCL27Q9Y4X3 112 aa2.04□□□□□ -2.08
LINC02541-201ENST00000427157 ILVBLA1L0T0 632 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 GTPBP10A4D1E9 387 aaKnown RBP2.03□□□□□ -2.08
LINC02541-201ENST00000427157 TRABD2BA6NFA1 517 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 TSPY2A6NKD2 308 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 ANXA9O76027 345 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 IGHV3-9P01782 118 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 SNRPCP09234 159 aaKnown RBP2.03□□□□□ -2.08
LINC02541-201ENST00000427157 FAM58BPP0C7Q3 252 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 MTIF2P46199 727 aaKnown RBP2.03□□□□□ -2.08
LINC02541-201ENST00000427157 LINC00315P59091 139 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 MFGE8Q08431 387 aaPredicted RBP2.03□□□□□ -2.08
LINC02541-201ENST00000427157 CD47Q08722 323 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 KCTD2Q14681 263 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 WDR49Q8IV35 697 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 CCDC197Q8NCU1 140 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 KIF18AQ8NI77 898 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 NMUR2Q9GZQ4 415 aa2.03□□□□□ -2.08
LINC02541-201ENST00000427157 MRPL17Q9NRX2 175 aaKnown RBP2.03□□□□□ -2.08
LINC02541-201ENST00000427157 FAM212BQ9NTI7 297 aaPredicted RBP2.03□□□□□ -2.08
LINC02541-201ENST00000427157 CHCHD3Q9NX63 227 aaKnown RBP2.03□□□□□ -2.08
LINC02541-201ENST00000427157 APOBEC3BQ9UH17 382 aaKnown RBP2.03□□□□□ -2.08
LINC02541-201ENST00000427157 ARHGAP23Q9P227 1491 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 SH3BP5O60239 455 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 SELENOFO60613 162 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 LRP3O75074 770 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 LETM1O95202 739 aaPredicted RBP2.02□□□□□ -2.09
LINC02541-201ENST00000427157 RPN1P04843 607 aaKnown RBP2.02□□□□□ -2.09
LINC02541-201ENST00000427157 PSG2P11465 335 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 EEF1DP29692 281 aaKnown RBP2.02□□□□□ -2.09
LINC02541-201ENST00000427157 OR1D2P34982 312 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 CASP2P42575 452 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 NPBWR1P48145 328 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 NPY4RP50391 375 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 CCR4P51679 360 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 LRRC63Q05C16 580 aa2.02□□□□□ -2.09
LINC02541-201ENST00000427157 PSMD6Q15008 389 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms