RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 SIMC1Q8NDZ2 872 aa14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 TRIM58Q8NG06 486 aa14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 ANKRD9Q96BM1 317 aaPredicted RBP14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 RHBDF1Q96CC6 855 aa14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 ZNF597Q96LX8 424 aa14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 SECISBP2Q96T21 854 aaKnown RBP14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 TIMP4Q99727 224 aa14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 EFCAB11Q9BUY7 163 aa14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 UBQLN3Q9H347 655 aa14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 KIAA1549Q9HCM3 1950 aa14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 FBN1P35555 2871 aaKnown RBP14.28□□□□□ -0.12
RPUSD3-204ENST00000424438 MXRA5Q9NR99 2828 aa14.27□□□□□ -0.12
RPUSD3-204ENST00000424438 OR6C76A6NM76 312 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 WDR47O94967 919 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 HPNP05981 417 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 TERF1P54274 439 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 TMEM35AQ53FP2 167 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 RNASEH2BQ5TBB1 312 aaKnown RBP14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 TCAIMQ8N3R3 496 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 BBOF1Q8ND07 529 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 CCT6BQ92526 530 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 MAGOHBQ96A72 148 aaKnown RBP14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 PTCD3Q96EY7 689 aaKnown RBP14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 PELOQ9BRX2 385 aaKnown RBP14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 YIPF4Q9BSR8 244 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 DOHHQ9BU89 302 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 MS4A12Q9NXJ0 267 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 EXPH5Q8NEV8 1989 aa14.27□□□□□ -0.13
RPUSD3-204ENST00000424438 C15orf38-AP3S2A0A0A6YYH1 394 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 LDB3O75112 727 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 CDH16O75309 829 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 SNX4O95219 450 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 ATP5A1P25705 553 aaKnown RBP14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 GALNSP34059 522 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 RPL21P46778 160 aaKnown RBP14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 CDK9P50750 372 aaKnown RBP14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 ARFIP1P53367 373 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 EEF1A1P68104 462 aaKnown RBP14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 PLIN5Q00G26 463 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 LAPTM5Q13571 262 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 TBCCQ15814 346 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 SPRED3Q2MJR0 410 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 PRAMEF20Q5VT98 475 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 EEF1A1P5Q5VTE0 462 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 ACOT4Q8N9L9 421 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 ZPLD1Q8TCW7 415 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 PIGTQ969N2 578 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 CAPZA3Q96KX2 299 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 RUNDC3BQ96NL0 473 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 EGFL8Q99944 293 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 WDR83Q9BRX9 315 aaKnown RBP14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 BDH2Q9BUT1 245 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 CNOT10Q9H9A5 744 aaKnown RBP14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 POPDC3Q9HBV1 291 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 ZNF490Q9ULM2 529 aaPredicted RBP14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 MED12LQ86YW9 2145 aa14.26□□□□□ -0.13
RPUSD3-204ENST00000424438 RNF212BA8MTL3 300 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 CAPN14A8MX76 684 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 CDC7O00311 574 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 CES2O00748 559 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 HIST1H1TP22492 207 aaPredicted RBP14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 GDF1P27539 372 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 CDC25BP30305 580 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 SERPINB1P30740 379 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 CASP2P42575 452 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 PAGE2BQ5JRK9 111 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 CCDC137Q6PK04 289 aaKnown RBP14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 ZNF793Q6ZN11 406 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 UBE3DQ7Z6J8 389 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 ST13P4Q8IZP2 240 aaPredicted RBP14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 OR10G3Q8NGC4 313 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 LINC01560Q8TB33 94 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 GRK7Q8WTQ7 553 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 TANKQ92844 425 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 RBM18Q96H35 190 aaKnown RBP14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 DGAT2Q96PD7 388 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 UCN2Q96RP3 112 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 NAP1L3Q99457 506 aaPredicted RBP14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 MAPKAP1Q9BPZ7 522 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 SFXN3Q9BWM7 321 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 MS4A8Q9BY19 250 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 PLAC1Q9HBJ0 212 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 DNAJC11Q9NVH1 559 aa14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 TRMT1Q9NXH9 659 aaKnown RBP14.25□□□□□ -0.13
RPUSD3-204ENST00000424438 A0A1W2PPR1 153 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 NPEPPSL1A6NEC2 478 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 INAFM1C9JVW0 142 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 TP53I11O14683 189 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 CLGNO14967 610 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 FGF17O60258 216 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 PRAMEF4O60810 478 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 GDF5P43026 501 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 TRPC1P48995 793 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 FNTAP49354 379 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 PCDH1Q08174 1060 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 EBPQ15125 230 aaKnown RBP14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 RPS6KA2Q15349 733 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 TGFBIQ15582 683 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 Q5PR19 223 aa14.24□□□□□ -0.13
RPUSD3-204ENST00000424438 PRAMEF9Q5VWM5 478 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms