RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TRAF4Q9BUZ4 470 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 ISCUQ9H1K1 167 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 TEX10Q9NXF1 929 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 CISD1Q9NZ45 108 aaKnown RBP5.71□□□□□ -1.5
SDCBP-203ENST00000424270 POU2F3Q9UKI9 436 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 PCDHB10Q9UN67 800 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 SNX8Q9Y5X2 465 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 PTGDR2Q9Y5Y4 395 aa5.71□□□□□ -1.5
SDCBP-203ENST00000424270 SCN3AQ9NY46 2000 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 EML6Q6ZMW3 1958 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 PABPN1LA6NDY0 278 aaKnown RBP5.7□□□□□ -1.5
SDCBP-203ENST00000424270 ESPNB1AK53 854 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF487B1APH4 448 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 PLOD2O00469 737 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 LCMT2O60294 686 aaKnown RBP5.7□□□□□ -1.5
SDCBP-203ENST00000424270 TRIM3O75382 744 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-203ENST00000424270 TGM6O95932 706 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 ERGP11308 486 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 COL6A2P12110 1019 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 BMP4P12644 408 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 CPN1P15169 458 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 KRT15P19012 456 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 PAMP19021 973 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 PCMT1P22061 227 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 RBL1P28749 1068 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 LIMS1P48059 325 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 TTPAP49638 278 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 STARP49675 285 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 CDH11P55287 796 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 HSD17B7P56937 341 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 TBPL1P62380 186 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 BTN3A2P78410 334 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 FOXL1Q12952 345 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 PWP1Q13610 501 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 MPEG1Q2M385 716 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 KLHL38Q2WGJ6 581 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 DPCR1Q3MIW9 517 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 BICRALQ6AI39 1079 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 AAGABQ6PD74 315 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 ANGPTL8Q6UXH0 198 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 SLC29A4Q7RTT9 530 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 STK32CQ86UX6 486 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 IFNEQ86WN2 208 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 TRIM42Q8IWZ5 723 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 RCOR2Q8IZ40 523 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 TAGAPQ8N103 731 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 CA13Q8N1Q1 262 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF619Q8N2I2 560 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 OR8K3Q8NH51 312 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 ASB11Q8WXH4 323 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 CCT6BQ92526 530 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 C11orf24Q96F05 449 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-203ENST00000424270 SFXN2Q96NB2 322 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 QKIQ96PU8 341 aaKnown RBP eCLIP5.7□□□□□ -1.5
SDCBP-203ENST00000424270 TMEM204Q9BSN7 226 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 SYT11Q9BT88 431 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 ALOXE3Q9BYJ1 711 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 PCBD2Q9H0N5 130 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 METTL7AQ9H8H3 244 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 C10orf88Q9H8K7 445 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 CLK4Q9HAZ1 481 aaKnown RBP5.7□□□□□ -1.5
SDCBP-203ENST00000424270 CATSPERZQ9NTU4 200 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 ZNHIT6Q9NWK9 470 aaKnown RBP5.7□□□□□ -1.5
SDCBP-203ENST00000424270 MED29Q9NX70 200 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 CLCF1Q9UBD9 225 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 LCMT1Q9UIC8 334 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 PTBP2Q9UKA9 531 aaKnown RBP5.7□□□□□ -1.5
SDCBP-203ENST00000424270 AMFRQ9UKV5 643 aa5.7□□□□□ -1.5
SDCBP-203ENST00000424270 PPIEQ9UNP9 301 aaKnown RBP5.7□□□□□ -1.5
SDCBP-203ENST00000424270 CHCHD2Q9Y6H1 151 aaPredicted RBP5.7□□□□□ -1.5
SDCBP-203ENST00000424270 HEATR5AQ86XA9 2040 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 A0A088AWK7 358 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 A0A0G2JN53 185 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 SYNDIG1LA6NDD5 238 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 GOLGA6L9A6NEM1 432 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 LGALS16A8MUM7 142 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 HACD1B0YJ81 288 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 CDC7O00311 574 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 EMC8O43402 210 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 ZBTB14O43829 449 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 CD8BP10966 210 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 ZNF10P21506 573 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-203ENST00000424270 FMO4P31512 558 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 SLC6A12P48065 614 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 PDLIM4P50479 330 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 CTBP2P56545 445 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 C21orf58P58505 322 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 IRX1P78414 480 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-203ENST00000424270 RCN2Q14257 317 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 SETDB1Q15047 1291 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 PGGHGQ32M88 737 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 BBS9Q3SYG4 887 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 TOR1AIP1Q5JTV8 583 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 HLA-DQA1Q5Y7H0 255 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 SBSNQ6UWP8 590 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 FBXL14Q8N1E6 418 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 AFAP1L2Q8N4X5 818 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 SLC15A4Q8N697 577 aa5.69□□□□□ -1.5
SDCBP-203ENST00000424270 LILRB1Q8NHL6 650 aaPredicted RBP5.69□□□□□ -1.5
SDCBP-203ENST00000424270 UTP15Q8TED0 518 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms