RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ZNF8P17098 575 aaPredicted RBP13.64□□□□□ -0.23
MSH5-206ENST00000423982 PSMA1P25786 263 aaKnown RBP13.64□□□□□ -0.23
MSH5-206ENST00000423982 CSNK1DP48730 415 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 HNMTP50135 292 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 GNG2P59768 71 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 CDK6Q00534 326 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 PUM1Q14671 1186 aaKnown RBP eCLIP13.64□□□□□ -0.23
MSH5-206ENST00000423982 GLYR1Q49A26 553 aaPredicted RBP13.64□□□□□ -0.23
MSH5-206ENST00000423982 CEP78Q5JTW2 689 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 TAGAPQ8N103 731 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 NLGN4YQ8NFZ3 816 aaPredicted RBP13.64□□□□□ -0.23
MSH5-206ENST00000423982 PRO3102Q9H379 93 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 SLC25A19Q9HC21 320 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 C1GALT1Q9NS00 363 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 GIMAP4Q9NUV9 329 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 CNOT2Q9NZN8 540 aaKnown RBP13.64□□□□□ -0.23
MSH5-206ENST00000423982 CARD8Q9Y2G2 431 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 FABP12A6NFH5 140 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 ZNF670-ZNF695F2Z2N8 137 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 CD70P32970 193 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 GPC1P35052 558 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 SOAT1P35610 550 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 RUNX1T1Q06455 604 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 SCN1BQ07699 218 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 EFR3AQ14156 821 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.63□□□□□ -0.23
MSH5-206ENST00000423982 SAXO2Q658L1 398 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 ANKRD54Q6NXT1 300 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 Q7L0L9 218 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 RBM45Q8IUH3 476 aaKnown RBP13.63□□□□□ -0.23
MSH5-206ENST00000423982 OR7G3Q8NG95 312 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 THSD1Q9NS62 852 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 CKAP5Q14008 2032 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 H3BN98 237 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 TPST2O60704 377 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 FGF19O95750 216 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 YES1P07947 543 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 CCNYL3P0C7X3 344 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 BDKRB1P46663 353 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 PREPP48147 710 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 LSM11P83369 360 aaKnown RBP eCLIP13.63□□□□□ -0.23
MSH5-206ENST00000423982 ZNF77Q15935 545 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 TOR1AIP1Q5JTV8 583 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 ZNF770Q6IQ21 691 aaPredicted RBP13.63□□□□□ -0.23
MSH5-206ENST00000423982 KRT73Q86Y46 540 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 TCEANCQ8N8B7 351 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 YIPF7Q8N8F6 280 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 FAM46DQ8NEK8 389 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 SLC22A4Q9H015 551 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 BRD9Q9H8M2 597 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 ACOXLQ9NUZ1 547 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 ZNF282Q9UDV7 671 aaPredicted RBP13.63□□□□□ -0.23
MSH5-206ENST00000423982 SNX7Q9UNH6 387 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 SH2B3Q9UQQ2 575 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 PLXND1Q9Y4D7 1925 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 CSTF2P33240 577 aaKnown RBP eCLIP13.63□□□□□ -0.23
MSH5-206ENST00000423982 MEF2AQ02078 507 aaPredicted RBP13.63□□□□□ -0.23
MSH5-206ENST00000423982 ZNF91Q05481 1191 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 LRRC74AQ0VAA2 488 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 PYDC2Q56P42 97 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 LIPJQ5W064 366 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 PHC2Q8IXK0 858 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 WDR48Q8TAF3 677 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 KXD1Q9BQD3 176 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 TXNL4BQ9NX01 149 aaKnown RBP13.63□□□□□ -0.23
MSH5-206ENST00000423982 PLEKHB1Q9UF11 243 aaPredicted RBP13.63□□□□□ -0.23
MSH5-206ENST00000423982 STUB1Q9UNE7 303 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 MTCH2Q9Y6C9 303 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 CLCA3PQ9Y6N3 262 aa13.63□□□□□ -0.23
MSH5-206ENST00000423982 HYKKA2RU49 373 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 SH3D21A4FU49 640 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 MEN1O00255 615 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 TSPAN19P0C672 248 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 IFI30P13284 250 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 TYRP14679 529 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 APEX1P27695 318 aaKnown RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 CHI3L1P36222 383 aaPredicted RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 MLLT1Q03111 559 aaPredicted RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 EEF1A2Q05639 463 aaKnown RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 NFE2L1Q14494 772 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 AGTRAPQ6RW13 159 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 MEX3DQ86XN8 651 aaKnown RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 ZNF557Q8N988 423 aaPredicted RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 ATP6V1C2Q8NEY4 427 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 CREB3L4Q8TEY5 395 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 GEMIN6Q8WXD5 167 aaKnown RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 MAPKAP1Q9BPZ7 522 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 WRAP53Q9BUR4 548 aaKnown RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 SPATA9Q9BWV2 254 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 RNF121Q9H920 327 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 REV1Q9UBZ9 1251 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 STOML2Q9UJZ1 356 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 ENPP4Q9Y6X5 453 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 OTOL1A6NHN0 477 aaPredicted RBP13.62□□□□□ -0.23
MSH5-206ENST00000423982 HEPACAM2A8MVW5 462 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 FADS2P1A8MWK0 482 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 SLC16A8O95907 504 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 TGFB1P01137 390 aa13.62□□□□□ -0.23
MSH5-206ENST00000423982 DDX6P26196 483 aaKnown RBP eCLIP13.62□□□□□ -0.23
MSH5-206ENST00000423982 TIA1P31483 386 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■■■■□ 19.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms