RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 CPZQ66K79 652 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 QSOX2Q6ZRP7 698 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 ARPINQ7Z6K5 226 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 ANKRD46Q86W74 232 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 ZC3H7AQ8IWR0 971 aaKnown RBP20.24■□□□□ 0.83
ABCF3-202ENST00000421340 CLECL1Q8IZS7 167 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 LRRC25Q8N386 305 aaPredicted RBP20.24■□□□□ 0.83
ABCF3-202ENST00000421340 TRIML2Q8N7C3 387 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 PMEPA1Q969W9 287 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 CGREF1Q99674 301 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 INPP5KQ9BT40 448 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 YIPF2Q9BWQ6 316 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 MMADHCQ9H3L0 296 aaPredicted RBP20.24■□□□□ 0.83
ABCF3-202ENST00000421340 GLIPR2Q9H4G4 154 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 SLAMF7Q9NQ25 335 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 DLL3Q9NYJ7 618 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 SLAMF8Q9P0V8 285 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 VPS4AQ9UN37 437 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 SATB2Q9UPW6 733 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 ERVK-11Q9UQG0 969 aa20.24■□□□□ 0.83
ABCF3-202ENST00000421340 GVINP1Q7Z2Y8 2422 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 VSTM2BA6NLU5 285 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 NVLO15381 856 aaKnown RBP20.23■□□□□ 0.83
ABCF3-202ENST00000421340 B4GALT2O60909 372 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 CPSF4O95639 269 aaKnown RBP20.23■□□□□ 0.83
ABCF3-202ENST00000421340 C6orf47O95873 294 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 ATP1B1P05026 303 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 GALNSP34059 522 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 NCBP2P52298 156 aaKnown RBP eCLIP20.23■□□□□ 0.83
ABCF3-202ENST00000421340 PSME3P61289 254 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 HBA1P69905 142 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 SLC13A2Q13183 592 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 SERTAD2Q14140 314 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 MAP7Q14244 749 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 IGF2-ASQ6U949 168 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 CCDC116Q8IYX3 515 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 SHISA5Q8N114 240 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 ARHGAP24Q8N264 748 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 PLPP5Q8NEB5 264 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 OR4A15Q8NGL6 344 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 SUN3Q8TAQ9 357 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 SH3GL1Q99961 368 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 FAM117AQ9C073 453 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 WDR54Q9H977 334 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 POLR1BQ9H9Y6 1135 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 IFT80Q9P2H3 777 aaPredicted RBP20.23■□□□□ 0.83
ABCF3-202ENST00000421340 AP3M1Q9Y2T2 418 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 PCDHB14Q9Y5E9 798 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 PCDHGA7Q9Y5G6 932 aa20.23■□□□□ 0.83
ABCF3-202ENST00000421340 C9orf172C9J069 976 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 GSC2O15499 205 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 LDB3O75112 727 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 STK17BO94768 372 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 ANP32DO95626 131 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 DLGAP3O95886 979 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 FEN1P39748 380 aaKnown RBP20.22■□□□□ 0.83
ABCF3-202ENST00000421340 STX4Q12846 297 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 COL9A2Q14055 689 aaPredicted RBP20.22■□□□□ 0.83
ABCF3-202ENST00000421340 ERV3-1Q14264 604 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 SPATS1Q496A3 300 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 RUNDC3AQ59EK9 446 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 C3orf38Q5JPI3 329 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 MRPL14Q6P1L8 145 aaKnown RBP20.22■□□□□ 0.83
ABCF3-202ENST00000421340 C6orf15Q6UXA7 325 aaPredicted RBP20.22■□□□□ 0.83
ABCF3-202ENST00000421340 ZNF621Q6ZSS3 439 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 DEFB107AQ8IZN7 70 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 OR8J3Q8NGG0 315 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 ANKRD27Q96NW4 1050 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 PELOQ9BRX2 385 aaKnown RBP20.22■□□□□ 0.83
ABCF3-202ENST00000421340 SEMA3GQ9NS98 782 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 NXT1Q9UKK6 140 aaKnown RBP20.22■□□□□ 0.83
ABCF3-202ENST00000421340 PRPF19Q9UMS4 504 aaKnown RBP20.22■□□□□ 0.83
ABCF3-202ENST00000421340 CLDN16Q9Y5I7 305 aa20.22■□□□□ 0.83
ABCF3-202ENST00000421340 FAM186AA6NE01 2351 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 DNAJC8O75937 253 aaPredicted RBP20.21■□□□□ 0.83
ABCF3-202ENST00000421340 ZGLP1P0C6A0 271 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 C8orf89P0DMQ9 161 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 UQCRC2P22695 453 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 PPIBP23284 216 aaKnown RBP20.21■□□□□ 0.83
ABCF3-202ENST00000421340 SLC6A2P23975 617 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 CDKN2CP42773 168 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 BTG2P78543 158 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 PLIN5Q00G26 463 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 VWA2Q5GFL6 755 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 NANOGP8Q6NSW7 305 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 FAM180BQ6P0A1 224 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 TMEM64Q6YI46 380 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 ZNF551Q7Z340 670 aaPredicted RBP20.21■□□□□ 0.83
ABCF3-202ENST00000421340 OR4N5Q8IXE1 308 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 MSRB3Q8IXL7 192 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 ST13P4Q8IZP2 240 aaPredicted RBP20.21■□□□□ 0.83
ABCF3-202ENST00000421340 STT3BQ8TCJ2 826 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 ALOXE3Q9BYJ1 711 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 TRIM4Q9C037 500 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 NANOGQ9H9S0 305 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 IL1RL2Q9HB29 575 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 SPAG4Q9NPE6 437 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 SLC25A37Q9NYZ2 338 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 VAPAQ9P0L0 249 aa20.21■□□□□ 0.83
ABCF3-202ENST00000421340 PADI1Q9ULC6 663 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms