RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 ZNF354AO60765 605 aaPredicted RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 ALDOAP04075 364 aaKnown RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 IGKV3-11P04433 115 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 BSGP35613 385 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 BUD31P41223 144 aaPredicted RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 KIR3DL1P43629 444 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 PIK3CGP48736 1102 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 HNRNPH2P55795 449 aaKnown RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 TNFRSF17Q02223 184 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 FOLH1Q04609 750 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 ASPHQ12797 758 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 CUL3Q13618 768 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 CPSF6Q16630 551 aaKnown RBP eCLIP8.73□□□□□ -1.01
NUP50-205ENST00000419387 NDUFAF5Q5TEU4 345 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 C18orf63Q68DL7 685 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 MRM1Q6IN84 353 aaKnown RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 METTL2BQ6P1Q9 378 aaKnown RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 GK5Q6ZS86 529 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 CEP128Q6ZU80 1094 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 GOLGA7Q7Z5G4 137 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 SLC22A16Q86VW1 577 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 IFT20Q8IY31 132 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 EIF1ADQ8N9N8 165 aaKnown RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 L3MBTL4Q8NA19 623 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 NUBPLQ8TB37 319 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 WDR20Q8TBZ3 569 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 CA5BP1Q8WTZ4 195 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 SDCCAG3Q96C92 435 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 ART5Q96L15 291 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 FAM173AQ9BQD7 235 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 TTTY12Q9BZ98 90 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 TSPYL1Q9H0U9 437 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 VPS11Q9H270 941 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 CDC42EP4Q9H3Q1 356 aaKnown RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 ACSS3Q9H6R3 686 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 RRAGDQ9NQL2 400 aaPredicted RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 SACM1LQ9NTJ5 587 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 LYARQ9NX58 379 aaKnown RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 COQ3Q9NZJ6 369 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 CPSF2Q9P2I0 782 aaKnown RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 MTRF1LQ9UGC7 380 aaKnown RBP8.73□□□□□ -1.01
NUP50-205ENST00000419387 RNF11Q9Y3C5 154 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 ATG4BQ9Y4P1 393 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 ASB4Q9Y574 426 aa8.73□□□□□ -1.01
NUP50-205ENST00000419387 MYO9AB2RTY4 2548 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 A0A0A6YYD5 115 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 G3V3Y1 287 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 EEDO75530 441 aaKnown RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 GLSO94925 669 aaPredicted RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 SIX3O95343 332 aaPredicted RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 SLU7O95391 586 aaKnown RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 CLDN9O95484 217 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 GPR75O95800 540 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 P04436 131 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 INHBAP08476 426 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 RBP1P09455 135 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 FAM58BPP0C7Q3 252 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 ALOX15P16050 662 aaPredicted RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 GCAP28676 217 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 GALNSP34059 522 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 NR0B1P51843 470 aaKnown RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 NEK2P51955 445 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 PLIN5Q00G26 463 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 ERCC6LQ2NKX8 1250 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 GXYLT1Q4G148 440 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 TECRLQ5HYJ1 363 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 TEX35Q5T0J7 233 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 SLC22A10Q63ZE4 541 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 CYP20A1Q6UW02 462 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 DGAT2L6Q6ZPD8 337 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 FAM47EQ6ZV65 393 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 C9orf40Q8IXQ3 194 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 GSPT2Q8IYD1 628 aaKnown RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 ST13P4Q8IZP2 240 aaPredicted RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 ZNF295-AS1Q8N0V1 137 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 PLD6Q8N2A8 252 aaKnown RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 MARVELD2Q8N4S9 558 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 SLC15A4Q8N697 577 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 PTGR2Q8N8N7 351 aaPredicted RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 SLC22A8Q8TCC7 542 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 SLC44A1Q8WWI5 657 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 ASB5Q8WWX0 329 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 ATP6V1E2Q96A05 226 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 PHF21BQ96EK2 531 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 FMO2Q99518 471 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 SPOCK3Q9BQ16 436 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 PELOQ9BRX2 385 aaKnown RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 ZNF717Q9BY31 904 aaPredicted RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 TRIM8Q9BZR9 551 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 TP63Q9H3D4 680 aaPredicted RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 NOL11Q9H8H0 719 aaKnown RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 DDX31Q9H8H2 851 aaKnown RBP8.72□□□□□ -1.01
NUP50-205ENST00000419387 ZDHHC11Q9H8X9 412 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 IL1RL2Q9HB29 575 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.72□□□□□ -1.01
NUP50-205ENST00000419387 ZNF358Q9NW07 568 aa8.72□□□□□ -1.01
NUP50-205ENST00000419387 A0A0G2JMM0 328 aa8.71□□□□□ -1.02
NUP50-205ENST00000419387 IQANK1A0A1B0GTG1 560 aa8.71□□□□□ -1.02
NUP50-205ENST00000419387 A0A1B0GVC2 190 aa8.71□□□□□ -1.02
NUP50-205ENST00000419387 A0A1W2PPB8 328 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms