RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 ITGA2P17301 1181 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 NELFEP18615 380 aaKnown RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 CDH2P19022 906 aaPredicted RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 POLR2CP19387 275 aaPredicted RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 CSNK2A2P19784 350 aaPredicted RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 AQP1P29972 269 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 LSSP48449 732 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 ANXA11P50995 505 aaKnown RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 ARHGDIAP52565 204 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 ISL1P61371 349 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 KCNC4Q03721 635 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 DUSP2Q05923 314 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 TOP3AQ13472 1001 aaPredicted RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 SUZ12Q15022 739 aaKnown RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 CNPY1Q3B7I2 92 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 PUS10Q3MIT2 529 aaKnown RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 ZIK1Q3SY52 487 aaPredicted RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 ANKRD34AQ69YU3 496 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 BHLHB9Q6PI77 547 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 C17orf82Q86X59 251 aaPredicted RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 LGI4Q8N135 537 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 KCT2Q8NC54 265 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 CHDHQ8NE62 594 aaPredicted RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 ZNF555Q8NEP9 628 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 RASSF5Q8WWW0 418 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 PATE1Q8WXA2 126 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 HLA-CQ95604 372 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 DGCR14Q96DF8 476 aaKnown RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 TMEM19Q96HH6 336 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 SHDQ96IW2 340 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 TPD52L3Q96J77 140 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 SLC6A18Q96N87 628 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 MUS81Q96NY9 551 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 BBS4Q96RK4 519 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 NELL2Q99435 816 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 BARD1Q99728 777 aaKnown RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 MAPKAP1Q9BPZ7 522 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 GRIP2Q9C0E4 1043 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 LYRM4Q9HD34 91 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 GIMAP4Q9NUV9 329 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 EXD2Q9NVH0 621 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 P2RX2Q9UBL9 471 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 NDRG4Q9ULP0 352 aaKnown RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 CA14Q9ULX7 337 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 NAALAD2Q9Y3Q0 740 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 SNX8Q9Y5X2 465 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 GPC6Q9Y625 555 aaPredicted RBP8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 ENPP4Q9Y6X5 453 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 PCDH15Q96QU1 1955 aa8.55□□□□□ -1.04
LINCMD1-201ENST00000418518 NUP210LQ5VU65 1888 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 PRAMEF27A3QJZ7 478 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 GSAPA4D1B5 854 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 C5orf58C9J3I9 102 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ZNF701M0R085 212 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 SOX1O00570 391 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 BCKDKO14874 412 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 AXIN1O15169 862 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ZSCAN9O15535 394 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 EMC8O43402 210 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ASNA1O43681 348 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 PRAMEF10O60809 474 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 PRKRAO75569 313 aaKnown RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 DIRAS1O95057 198 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 CPNE6O95741 557 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 STATHP02808 62 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 OPN1SWP03999 348 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 CSF2P04141 144 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 WNT1P04628 370 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 BCHEP06276 602 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 FHP07954 510 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 CCDC159P0C7I6 412 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ETS2P15036 469 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 JUNBP17275 347 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 RHCEP18577 417 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ZNF10P21506 573 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 PRKACGP22612 351 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 CRHBPP24387 322 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 BUD31P41223 144 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 FASLGP48023 281 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 KCNJ5P48544 419 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 MAN2A2P49641 1150 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 NCBP2P52298 156 aaKnown RBP eCLIP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 CASP9P55211 416 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 RAB8AP61006 207 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 RPS26P62854 115 aaKnown RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 RACK1P63244 317 aaKnown RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 CD47Q08722 323 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 PPP1R8Q12972 351 aaKnown RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 TP53BP2Q13625 1128 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 SPDYE7PQ495Y7 208 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 EXOSC6Q5RKV6 272 aaKnown RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 C18orf63Q68DL7 685 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 LAIR2Q6ISS4 152 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 PTCRAQ6ISU1 281 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 FAM180BQ6P0A1 224 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 TNFAIP8L2Q6P589 184 aaPredicted RBP8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ZNF773Q6PK81 442 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ISLR2Q6UXK2 745 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 ABHD13Q7L211 337 aa8.54□□□□□ -1.04
LINCMD1-201ENST00000418518 TAF8Q7Z7C8 310 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms