RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 SLAMF1Q13291 335 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 SLBPQ14493 270 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00940-201ENST00000418006 IRF3Q14653 427 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 NOXRED1Q6NXP6 359 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 RD3Q7Z3Z2 195 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 ZNF740Q8NDX6 193 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 SETD6Q8TBK2 473 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 SH3KBP1Q96B97 665 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 CMTM7Q96FZ5 175 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 MRGPRX1Q96LB2 322 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 CEP19Q96LK0 163 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 C1QTNF2Q9BXJ5 285 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 AMBNQ9NP70 447 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 IL1RAPQ9NPH3 570 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 ACOXLQ9NUZ1 547 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 IMP3Q9NV31 184 aaKnown RBP13.18□□□□□ -0.3
LINC00940-201ENST00000418006 SATB2Q9UPW6 733 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 PRELID1Q9Y255 219 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 PCDHGB2Q9Y5G2 931 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 LAMA1P25391 3075 aa13.18□□□□□ -0.3
LINC00940-201ENST00000418006 TCRBV21S2A2A0A5A6 115 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 POM121BA6NF01 834 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 UGT2B17O75795 530 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 VIPP01282 170 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 TRIM23P36406 574 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 RPS13P62277 151 aaKnown RBP13.17□□□□□ -0.3
LINC00940-201ENST00000418006 METRNLQ641Q3 311 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 GRHL2Q6ISB3 625 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 SLCO4C1Q6ZQN7 724 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 SYT12Q8IV01 421 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 PGBD3Q8N328 593 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 HMGB4Q8WW32 186 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 MYDGFQ969H8 173 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 RAD51AP1Q96B01 352 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 C12orf66Q96MD2 445 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 FYTTD1Q96QD9 318 aaKnown RBP13.17□□□□□ -0.3
LINC00940-201ENST00000418006 CITED4Q96RK1 184 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 CPPED1Q9BRF8 314 aaPredicted RBP13.17□□□□□ -0.3
LINC00940-201ENST00000418006 SPNS1Q9H2V7 528 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 RANGRFQ9HD47 186 aaPredicted RBP13.17□□□□□ -0.3
LINC00940-201ENST00000418006 SIRT5Q9NXA8 310 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 TRAPPC4Q9Y296 219 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 NCKAP1Q9Y2A7 1128 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 PCDHGA6Q9Y5G7 932 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 SNX8Q9Y5X2 465 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 PCM1Q15154 2024 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 SLITRK5O94991 958 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 TGFB1P01137 390 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 IL6P05231 212 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 CDK1P06493 297 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 TRAPPC2P0DI81 140 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 TRAPPC2BP0DI82 140 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 NDUFV2P19404 249 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 DRD1P21728 446 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 HNF4AP41235 474 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 HTR2BP41595 481 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 CRISP3P54108 245 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 SMU1Q2TAY7 513 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 ARMCX4Q5H9R4 360 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 ARMC4Q5T2S8 1044 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 GGHQ92820 318 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 POP5Q969H6 163 aaKnown RBP13.17□□□□□ -0.3
LINC00940-201ENST00000418006 FERD3LQ96RJ6 166 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 CLMPQ9H6B4 373 aa13.17□□□□□ -0.3
LINC00940-201ENST00000418006 SAMD4AQ9UPU9 718 aaKnown RBP13.17□□□□□ -0.3
LINC00940-201ENST00000418006 SAMHD1Q9Y3Z3 626 aaKnown RBP13.17□□□□□ -0.3
LINC00940-201ENST00000418006 PRAMEF33A0A0G2JMD5 474 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 A0A0X1KG70 313 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 OR52A4PA6NMU1 304 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 KIAA0513O60268 411 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 UGDHO60701 494 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 CYP7B1O75881 506 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 CEACAM5P06731 702 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 PSMB5P28074 263 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 TNFSF8P32971 234 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 RGS6P49758 472 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 ACSM2AQ08AH3 577 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 KRT33BQ14525 404 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 FAM214AQ32MH5 1076 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 ACSM2BQ68CK6 577 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 KIAA1161Q6NSJ0 714 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 MED27Q6P2C8 311 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 Q6ZPB1 254 aaPredicted RBP13.16□□□□□ -0.3
LINC00940-201ENST00000418006 RNF165Q6ZSG1 346 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 DCUN1D3Q8IWE4 304 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 DEPDC4Q8N2C3 294 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 TRNT1Q96Q11 434 aaKnown RBP13.16□□□□□ -0.3
LINC00940-201ENST00000418006 APOOQ9BUR5 198 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 XKR8Q9H6D3 395 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 STMN3Q9NZ72 180 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 TAC3Q9UHF0 121 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 GOLGA4Q13439 2230 aaKnown RBP13.16□□□□□ -0.3
LINC00940-201ENST00000418006 E9PQ18 207 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 H0YIV9 168 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 TFECO14948 347 aaPredicted RBP13.16□□□□□ -0.3
LINC00940-201ENST00000418006 PTHP01270 115 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 ADORA3P0DMS8 318 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 IL7P13232 177 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 S100A3P33764 101 aa13.16□□□□□ -0.3
LINC00940-201ENST00000418006 FBXO43Q4G163 708 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms