RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 BACE2Q9Y5Z0 518 aa7.49□□□□□ -1.21
SIK3-203ENST00000415541 PLXNB2O15031 1838 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 TNFRSF10BO14763 440 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 KDM4BO94953 1096 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 CDRT1O95170 752 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 ZNF682O95780 498 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 PTHP01270 115 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 IL1AP01583 271 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 PVALBP20472 110 aaPredicted RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 SLC1A2P43004 574 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 CSRP3P50461 194 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 CAPZA1P52907 286 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 EEF1A1P68104 462 aaKnown RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 RELQ04864 619 aaPredicted RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 EEF1A2Q05639 463 aaKnown RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 TCEA2Q15560 299 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 SYTL3Q4VX76 610 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 SIRPB2Q5JXA9 342 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 EEF1A1P5Q5VTE0 462 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 SERPINA13PQ6UXR4 307 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 ZFAND4Q86XD8 727 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 FAM86B1Q8N7N1 296 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 PTGR2Q8N8N7 351 aaPredicted RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 ATP6V1C2Q8NEY4 427 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 PGAP3Q96FM1 320 aaPredicted RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 SLC22A12Q96S37 553 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 CARS2Q9HA77 564 aaKnown RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 TMEM248Q9NWD8 314 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 FKBPLQ9UIM3 349 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 RNF215Q9Y6U7 377 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 ANK1P16157 1881 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 DICER1Q9UPY3 1922 aaKnown RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 ARHGEF33A8MVX0 844 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 ZNF670-ZNF695F2Z2N8 137 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 K7ERQ8 282 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 AKAP8O43823 692 aaKnown RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 PCDH8O95206 1070 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 ALPIP09923 528 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 IDH2P48735 452 aaKnown RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 CAMK2GQ13555 558 aaPredicted RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 OPCMLQ14982 345 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 LAIR1Q6GTX8 287 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 PIAS4Q8N2W9 510 aaPredicted RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 ZNF565Q8N9K5 539 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 CAMKVQ8NCB2 501 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 DENND6BQ8NEG7 585 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 UCN3Q969E3 161 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 HRASLS5Q96KN8 279 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 ZNF583Q96ND8 569 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 SLC38A2Q96QD8 506 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 SPRTNQ9H040 489 aaPredicted RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 GSN-AS1Q9NRJ2 163 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 BABAM2Q9NXR7 383 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 WWOXQ9NZC7 414 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 CXXC1Q9P0U4 656 aaPredicted RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 SLAMF8Q9P0V8 285 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 LOC102723532A0A0G2JNH3 316 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 A8MXK9 166 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 UBFD1O14562 309 aaKnown RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 ZNF197O14709 1029 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 GPX5O75715 221 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 SOX30O94993 753 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 LGI1O95970 557 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 C9P02748 559 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 ZNF7P17097 686 aaPredicted RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 HK1P19367 917 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 SH3BP2P78314 561 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 DDX39BQ13838 428 aaKnown RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 RAB33AQ14088 237 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 OTUD1Q5VV17 481 aaPredicted RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 SLC8B1Q6J4K2 584 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 HTR3DQ70Z44 454 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 PGAP1Q75T13 922 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 GPR155Q7Z3F1 870 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 ZER1Q7Z7L7 766 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 GPR149Q86SP6 731 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 PDZD9Q8IXQ8 264 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 ADGRF3Q8IZF5 1079 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 UMODL1-AS1Q8N2C9 162 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 FTMTQ8N4E7 242 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 OR2T4Q8NH00 348 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 USP7Q93009 1102 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 NT5C3BQ969T7 300 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 MYO19Q96H55 970 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 OR51J1Q9H342 316 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 UCK1Q9HA47 277 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 GPR83Q9NYM4 423 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 RPS6KA6Q9UK32 745 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 NDRG2Q9UN36 371 aaKnown RBP7.48□□□□□ -1.21
SIK3-203ENST00000415541 ENTPD4Q9Y227 616 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 DTX4Q9Y2E6 619 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 TET1Q8NFU7 2136 aa7.48□□□□□ -1.21
SIK3-203ENST00000415541 I6L893 689 aaPredicted RBP7.47□□□□□ -1.21
SIK3-203ENST00000415541 DNASE2O00115 360 aaPredicted RBP7.47□□□□□ -1.21
SIK3-203ENST00000415541 SSNA1O43805 119 aa7.47□□□□□ -1.21
SIK3-203ENST00000415541 HPGDSO60760 199 aa7.47□□□□□ -1.21
SIK3-203ENST00000415541 FABP3P05413 133 aa7.47□□□□□ -1.21
SIK3-203ENST00000415541 CA3P07451 260 aa7.47□□□□□ -1.21
SIK3-203ENST00000415541 SLC19A1P41440 591 aa7.47□□□□□ -1.21
SIK3-203ENST00000415541 HSPA7P48741 367 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms