RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 LRRC34Q8IZ02 419 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 FAM9CQ8IZT9 166 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 SHISA5Q8N114 240 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 ZNF843Q8N446 348 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 SIRT6Q8N6T7 355 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 HORMAD2Q8N7B1 307 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 NFAM1Q8NET5 270 aaPredicted RBP13.67□□□□□ -0.22
LIMS1-206ENST00000414829 OR5L2Q8NGL0 311 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 SUN3Q8TAQ9 357 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 PNPLA2Q96AD5 504 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 TM4SF18Q96CE8 201 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 KLHL29Q96CT2 875 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 ZNF764Q96H86 408 aaPredicted RBP13.67□□□□□ -0.22
LIMS1-206ENST00000414829 FBXL20Q96IG2 436 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 DEFB126Q9BYW3 111 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 SEMA4CQ9C0C4 833 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 B3GNT3Q9Y2A9 372 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 DLGAP4Q9Y2H0 992 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 CCL27Q9Y4X3 112 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 NUP210LQ5VU65 1888 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 GLOD5A6NK44 160 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 OR6C76A6NM76 312 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 A8MUA0 341 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 A8MUI8 341 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 TGFBR3LH3BV60 316 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 LSM1O15116 133 aaKnown RBP13.66□□□□□ -0.22
LIMS1-206ENST00000414829 ZFAND5O76080 213 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 SLITRK5O94991 958 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 IL3P08700 152 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 LINC00032P0C843 101 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 CPMP14384 443 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 PORP16435 677 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-206ENST00000414829 DDCP20711 480 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 WDR4P57081 412 aaKnown RBP13.66□□□□□ -0.22
LIMS1-206ENST00000414829 RPL38P63173 70 aaKnown RBP13.66□□□□□ -0.22
LIMS1-206ENST00000414829 ID2Q02363 134 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 BST1Q10588 318 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 SMU1Q2TAY7 513 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 UGT3A2Q3SY77 523 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 ACER2Q5QJU3 275 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 B3GNTL1Q67FW5 361 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-206ENST00000414829 NOXRED1Q6NXP6 359 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 ATG14Q6ZNE5 492 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 GALNT12Q8IXK2 581 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 ARMC10Q8N2F6 343 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 LRRC25Q8N386 305 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-206ENST00000414829 APCDD1LQ8NCL9 501 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 OR1N1Q8NGS0 311 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 SLC2A12Q8TD20 617 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 C16orf78Q8WTQ4 265 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 PTPMT1Q8WUK0 201 aaPredicted RBP13.66□□□□□ -0.22
LIMS1-206ENST00000414829 DYDC1Q8WWB3 177 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 PSMF1Q92530 271 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 RIT1Q92963 219 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 NCLNQ969V3 563 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 ARL8AQ96BM9 186 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 ERP27Q96DN0 273 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 EBPLQ9BY08 206 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 OR8D2Q9GZM6 311 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 ZDHHC2Q9UIJ5 367 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 UTS2RQ9UKP6 389 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 MAPRE3Q9UPY8 281 aa13.66□□□□□ -0.22
LIMS1-206ENST00000414829 ATMQ13315 3056 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 TRAV17A0A0B4J275 112 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 TMEM233B4DJY2 109 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 MASP2O00187 686 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 SKAP2O75563 359 aaPredicted RBP13.65□□□□□ -0.22
LIMS1-206ENST00000414829 PRKRAO75569 313 aaKnown RBP13.65□□□□□ -0.22
LIMS1-206ENST00000414829 PDGFAP04085 211 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 ATP1B1P05026 303 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 NTSP30990 170 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 XKP51811 444 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 RAE1P78406 368 aaKnown RBP13.65□□□□□ -0.22
LIMS1-206ENST00000414829 INAQ16352 499 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 TTMPQ5BVD1 217 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 LINC00696Q6ZRV3 163 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 RPS19BP1Q86WX3 136 aaKnown RBP13.65□□□□□ -0.22
LIMS1-206ENST00000414829 OR4N5Q8IXE1 308 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 GPALPP1Q8IXQ4 340 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 CDC26Q8NHZ8 85 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 HAS2Q92819 552 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 ZBTB9Q96C00 473 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 TUBGCP3Q96CW5 907 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 FCRL1Q96LA6 429 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 TUBB1Q9H4B7 451 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 MANSC1Q9H8J5 431 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 SLAMF7Q9NQ25 335 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 STMN3Q9NZ72 180 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 CFL2Q9Y281 166 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 POLR3HQ9Y535 204 aaPredicted RBP13.65□□□□□ -0.22
LIMS1-206ENST00000414829 CHD6Q8TD26 2715 aa13.65□□□□□ -0.22
LIMS1-206ENST00000414829 OR5H15A6NDH6 313 aa13.64□□□□□ -0.23
LIMS1-206ENST00000414829 TRPC5OSA6NMA1 111 aa13.64□□□□□ -0.23
LIMS1-206ENST00000414829 PGRMC2O15173 223 aa13.64□□□□□ -0.23
LIMS1-206ENST00000414829 ITM2AO43736 263 aa13.64□□□□□ -0.23
LIMS1-206ENST00000414829 SNNO75324 88 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-206ENST00000414829 LYPLA1O75608 230 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-206ENST00000414829 ERAL1O75616 437 aaKnown RBP13.64□□□□□ -0.23
LIMS1-206ENST00000414829 CELA2AP08217 269 aa13.64□□□□□ -0.23
LIMS1-206ENST00000414829 PRPS2P11908 318 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms