RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SLC46A2Q9BY10 475 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.95□□□□□ -0.984e-55■■■■□ 25.9
SNHG3-201ENST00000413987 DKK4Q9UBT3 224 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 KLQ9UEF7 1012 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 ACOT9Q9Y305 439 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 MTCL1Q9Y4B5 1905 aaKnown RBP8.95□□□□□ -0.98
SNHG3-201ENST00000413987 SHROOM3Q8TF72 1996 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 AURKAO14965 403 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 IDH3BO43837 385 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 TPST1O60507 370 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 GUCY1B2O75343 617 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 ALX3O95076 343 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 TGM6O95932 706 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 NR4A1P22736 598 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 ELK4P28324 431 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 CTF1Q16619 201 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 CYP51A1Q16850 503 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 COQ5Q5HYK3 327 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 PAGE2BQ5JRK9 111 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 MANEALQ5VSG8 457 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 C18orf63Q68DL7 685 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 KCNMB4Q86W47 210 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 ZNF683Q8IZ20 524 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 RHOXF1Q8NHV9 184 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 ITFG1Q8TB96 612 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 GPBAR1Q8TDU6 330 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 ZNF707Q96C28 371 aaPredicted RBP8.95□□□□□ -0.98
SNHG3-201ENST00000413987 SNX18Q96RF0 628 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 MRPL57Q9BQC6 102 aaKnown RBP8.95□□□□□ -0.98
SNHG3-201ENST00000413987 MCMBPQ9BTE3 642 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 RHOJQ9H4E5 214 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 ZSCAN32Q9NX65 697 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 KLHL28Q9NXS3 571 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 NPAP1Q9NZP6 1156 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 ADAM30Q9UKF2 790 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 AGO1Q9UL18 857 aaKnown RBP8.95□□□□□ -0.98
SNHG3-201ENST00000413987 PDE10AQ9Y233 779 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 PLEKHA6Q9Y2H5 1048 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 LIPGQ9Y5X9 500 aa8.95□□□□□ -0.98
SNHG3-201ENST00000413987 CROCCQ5TZA2 2017 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 MN1Q10571 1320 aaPredicted RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 A0A087WZY1 265 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 ZCWPW2A0A1B0GU75 182 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 ELOVL7A1L3X0 281 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 OOEPA6NGQ2 149 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 ERI2A8K979 691 aaKnown RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 ZNF99A8MXY4 864 aaPredicted RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 H0Y858 1186 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 ARNTLO00327 626 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 NME4O00746 187 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 HCRTR2O43614 444 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 NADKO95544 446 aaPredicted RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 GLP2RO95838 553 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 HPRP00739 348 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 BMP4P12644 408 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 CEBPBP17676 345 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 WASP42768 502 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 GATA4P43694 442 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 NPY2RP49146 381 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 IL11RAQ14626 422 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 PIP5KL1Q5T9C9 394 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 GPR65Q8IYL9 337 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 LGI2Q8N0V4 545 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 OR7G3Q8NG95 312 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 PAQR8Q8TEZ7 354 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 ATL1Q8WXF7 558 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 MRPS31Q92665 395 aaKnown RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 TNFRSF14Q92956 283 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 ELMO2Q96JJ3 720 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 NECTIN4Q96NY8 510 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 SSX3Q99909 188 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 C1QTNF3Q9BXJ4 246 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 KLF16Q9BXK1 252 aaPredicted RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 TINAGL1Q9GZM7 467 aaPredicted RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 RCOR3Q9P2K3 495 aaPredicted RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 XPR1Q9UBH6 696 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 SLC25A10Q9UBX3 287 aaPredicted RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 EIF3LQ9Y262 564 aaKnown RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 ACTL7AQ9Y615 435 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 C2orf16Q68DN1 1984 aa8.94□□□□□ -0.98
SNHG3-201ENST00000413987 MYO18AQ92614 2054 aaKnown RBP8.94□□□□□ -0.98
SNHG3-201ENST00000413987 NYNRINQ9P2P1 1898 aaKnown RBP8.93□□□□□ -0.98
SNHG3-201ENST00000413987 A0A087X1B8 175 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 TYW5A2RUC4 315 aaKnown RBP8.93□□□□□ -0.98
SNHG3-201ENST00000413987 OR2A25A4D2G3 310 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 ARPC2O15144 300 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 INPP4BO15327 924 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 TLX2O43763 284 aaPredicted RBP8.93□□□□□ -0.98
SNHG3-201ENST00000413987 TRIM3O75382 744 aaPredicted RBP8.93□□□□□ -0.98
SNHG3-201ENST00000413987 UPK1BO75841 260 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 PTTG1O95997 202 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 OR8G3PP0DMU2 310 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 AREGP15514 252 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 TACR2P21452 398 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 ANXA11P50995 505 aaKnown RBP8.93□□□□□ -0.98
SNHG3-201ENST00000413987 AIF1P55008 147 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 CYP4F2P78329 520 aa8.93□□□□□ -0.98
SNHG3-201ENST00000413987 DLX2Q07687 328 aaPredicted RBP8.93□□□□□ -0.98
SNHG3-201ENST00000413987 TMEM115Q12893 351 aaPredicted RBP8.93□□□□□ -0.98
SNHG3-201ENST00000413987 OLIG2Q13516 323 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms