RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 PFKFB4Q16877 469 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 HYAL4Q2M3T9 481 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 NDUFAF5Q5TEU4 345 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 MROH9Q5TGP6 573 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 MRM1Q6IN84 353 aaKnown RBP17.73■□□□□ 0.43
CPSF7-204ENST00000413232 ZNF585AQ6P3V2 769 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 GPR180Q86V85 440 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 FAM109AQ8N4B1 249 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 OR5M3Q8NGP4 307 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 NUBPLQ8TB37 319 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 CHTF18Q8WVB6 975 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 RGMAQ96B86 450 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 GPR78Q96P69 363 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 CNPPD1Q9BV87 410 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 COPS7AQ9UBW8 275 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 ASB4Q9Y574 426 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 SPACA6W5XKT8 324 aa17.73■□□□□ 0.43
CPSF7-204ENST00000413232 KIAA1549Q9HCM3 1950 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 A0A1W2PR48 441 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 A0A1W2PS29 197 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 ESYT3A0FGR9 886 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 GLOD5A6NK44 160 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 PROM1O43490 865 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 CLPSP04118 112 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 P04436 131 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 RFPL3SP0C7P2 107 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 ENDOUP21128 410 aaKnown RBP17.72■□□□□ 0.43
CPSF7-204ENST00000413232 ACVR2AP27037 513 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 STX2P32856 288 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 BSGP35613 385 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 PIK3CBP42338 1070 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 NEK2P51955 445 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 SLC7A5Q01650 507 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 MYLK4Q86YV6 388 aaPredicted RBP17.72■□□□□ 0.43
CPSF7-204ENST00000413232 ZCCHC7Q8N3Z6 543 aaKnown RBP17.72■□□□□ 0.43
CPSF7-204ENST00000413232 RHEBL1Q8TAI7 183 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 TANKQ92844 425 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 RBM18Q96H35 190 aaKnown RBP17.72■□□□□ 0.43
CPSF7-204ENST00000413232 FBXL20Q96IG2 436 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 TTYH2Q9BSA4 534 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 SNX15Q9NRS6 342 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 RNF11Q9Y3C5 154 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 TSC22D4Q9Y3Q8 395 aa17.72■□□□□ 0.43
CPSF7-204ENST00000413232 A0A0A6YYD5 115 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 OR14I1A6ND48 311 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 KLK8O60259 260 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 SIX3O95343 332 aaPredicted RBP17.71■□□□□ 0.43
CPSF7-204ENST00000413232 GLI4P10075 376 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 COX7A2P14406 83 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 ALOX15P16050 662 aaPredicted RBP17.71■□□□□ 0.43
CPSF7-204ENST00000413232 MSX1P28360 303 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 SERPINB1P30740 379 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 PIK3CGP48736 1102 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 RAP1GDS1P52306 607 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 HERVK_113P63132 956 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 ERVK-8P63133 956 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 CAV1Q03135 178 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 SLC10A1Q14973 349 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 CPSF6Q16630 551 aaKnown RBP eCLIP17.71■□□□□ 0.43
CPSF7-204ENST00000413232 PRAMEF20Q5VT98 475 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 LIPJQ5W064 366 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 SLC22A10Q63ZE4 541 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 LIX1LQ8IVB5 337 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 DMRTC2Q8IXT2 367 aaPredicted RBP17.71■□□□□ 0.43
CPSF7-204ENST00000413232 PLD6Q8N2A8 252 aaKnown RBP17.71■□□□□ 0.43
CPSF7-204ENST00000413232 ERVK-6Q9BXR3 956 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 ACTR8Q9H981 624 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 KCNJ16Q9NPI9 418 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 MS4A12Q9NXJ0 267 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 SPRR3Q9UBC9 169 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 ADGRE2Q9UHX3 823 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 ERVK-19Q9WJR5 959 aa17.71■□□□□ 0.43
CPSF7-204ENST00000413232 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.71■□□□□ 0.43
CPSF7-204ENST00000413232 A0A0G2JNJ9 132 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 H0YIV9 168 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 AQP7O14520 342 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 LRATO95237 230 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 GBAP04062 536 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 ALDOAP04075 364 aaKnown RBP17.7■□□□□ 0.42
CPSF7-204ENST00000413232 CAPN3P20807 821 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 ADH7P40394 386 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 ALDH18A1P54886 795 aaKnown RBP17.7■□□□□ 0.42
CPSF7-204ENST00000413232 PLIN5Q00G26 463 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 NAB1Q13506 487 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 ZNF267Q14586 743 aaPredicted RBP17.7■□□□□ 0.42
CPSF7-204ENST00000413232 ACAD11Q709F0 780 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 GOLGA7Q7Z5G4 137 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 CDH24Q86UP0 819 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 ST13P4Q8IZP2 240 aaPredicted RBP17.7■□□□□ 0.42
CPSF7-204ENST00000413232 OR10G3Q8NGC4 313 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 WDR20Q8TBZ3 569 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 PAQR8Q8TEZ7 354 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 SPACA9Q96E40 222 aaPredicted RBP17.7■□□□□ 0.42
CPSF7-204ENST00000413232 RAB17Q9H0T7 212 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 DDX31Q9H8H2 851 aaKnown RBP17.7■□□□□ 0.42
CPSF7-204ENST00000413232 ZDHHC18Q9NUE0 388 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 ZNF358Q9NW07 568 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 Q9UFV3 132 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 PHF11Q9UIL8 331 aa17.7■□□□□ 0.42
CPSF7-204ENST00000413232 ANGPTL3Q9Y5C1 460 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms