RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 LRFN1Q9P244 771 aa12.23□□□□□ -0.45
SSB-203ENST00000413002 ABI3Q9P2A4 366 aa12.23□□□□□ -0.45
SSB-203ENST00000413002 PPIEQ9UNP9 301 aaKnown RBP12.23□□□□□ -0.45
SSB-203ENST00000413002 PTGDR2Q9Y5Y4 395 aa12.23□□□□□ -0.45
SSB-203ENST00000413002 BLACEA4D250 179 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 WWP2O00308 870 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 RGS16O15492 202 aaPredicted RBP12.22□□□□□ -0.45
SSB-203ENST00000413002 OR10H2O60403 315 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 TRIM13O60858 407 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 CRCPO75575 148 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 ITGA10O75578 1167 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 OR2J2O76002 312 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 NEURL1O76050 574 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 ZFAND5O76080 213 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 ALDH9A1P49189 494 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 RAE1P78406 368 aaKnown RBP12.22□□□□□ -0.45
SSB-203ENST00000413002 SRSF1Q07955 248 aaKnown RBP eCLIP12.22□□□□□ -0.45
SSB-203ENST00000413002 CSTF3Q12996 717 aaKnown RBP12.22□□□□□ -0.45
SSB-203ENST00000413002 ZNF267Q14586 743 aaPredicted RBP12.22□□□□□ -0.45
SSB-203ENST00000413002 SPDYAQ5MJ70 313 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 CEP85LQ5SZL2 805 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 OR52E8Q6IFG1 317 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 HSDL2Q6YN16 418 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 ZNF227Q86WZ6 799 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 MORN4Q8NDC4 146 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 PRR7Q8TB68 274 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 ZNF721Q8TF20 911 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 TM4SF18Q96CE8 201 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 CNPPD1Q9BV87 410 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 EBPLQ9BY08 206 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 NMRK1Q9NWW6 199 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 MKS1Q9NXB0 559 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 ADAM29Q9UKF5 820 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 STK38LQ9Y2H1 464 aa12.22□□□□□ -0.45
SSB-203ENST00000413002 SHANK1Q9Y566 2161 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 GNG14A0A1W2PPG7 69 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 TMEM233B4DJY2 109 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 ZNF354AO60765 605 aaPredicted RBP12.21□□□□□ -0.45
SSB-203ENST00000413002 ERAL1O75616 437 aaKnown RBP12.21□□□□□ -0.45
SSB-203ENST00000413002 CBX6O95503 412 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 CHRNGP07510 517 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 COX7A2P14406 83 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 PIK3R1P27986 724 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 FEN1P39748 380 aaKnown RBP12.21□□□□□ -0.45
SSB-203ENST00000413002 CYB561P49447 251 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 XKP51811 444 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 ERVK-8P63133 956 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 PLIN5Q00G26 463 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 MAPKAPK3Q16644 382 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 FAM180AQ6UWF9 173 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 GALNTL5Q7Z4T8 443 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 ST13P4Q8IZP2 240 aaPredicted RBP12.21□□□□□ -0.45
SSB-203ENST00000413002 LGI4Q8N135 537 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 TMEM156Q8N614 296 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 CDC26Q8NHZ8 85 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 AGR3Q8TD06 166 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 FAR1Q8WVX9 515 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 PKNOX2Q96KN3 472 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 BARD1Q99728 777 aaKnown RBP12.21□□□□□ -0.45
SSB-203ENST00000413002 AGPAT4Q9NRZ5 378 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 HEY2Q9UBP5 337 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 MID2Q9UJV3 735 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 ERVK-19Q9WJR5 959 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 PCDHA9Q9Y5H5 950 aa12.21□□□□□ -0.45
SSB-203ENST00000413002 CPAMD8Q8IZJ3 1885 aa12.21□□□□□ -0.46
SSB-203ENST00000413002 WDR91A4D1P6 747 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 CCDC151A5D8V7 595 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 FCHO1O14526 889 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 TYROBPO43914 113 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 PCDH7O60245 1069 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 SLC25A12O75746 678 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 RASAL1O95294 804 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 SP1P08047 785 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 IL3P08700 152 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 CT62P0C5K7 136 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 SLC35E2P0CK97 266 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 HSD3B1P14060 373 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 CD46P15529 392 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 HSD3B2P26439 372 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 MST1P26927 711 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 HLCSP50747 726 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 HK2P52789 917 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 RNF4P78317 190 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 DUSP2Q05923 314 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 ACSM2AQ08AH3 577 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 IMPG1Q17R60 797 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 ACSM2BQ68CK6 577 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 SLC25A25Q6KCM7 469 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 RPUSD3Q6P087 351 aaKnown RBP12.2□□□□□ -0.46
SSB-203ENST00000413002 MDGA2Q7Z553 956 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.2□□□□□ -0.46
SSB-203ENST00000413002 EXOC3L1Q86VI1 746 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 C9orf40Q8IXQ3 194 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 GBP7Q8N8V2 638 aaPredicted RBP12.2□□□□□ -0.46
SSB-203ENST00000413002 OR4K14Q8NGD5 310 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 RIT1Q92963 219 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 C5orf34Q96MH7 638 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 TSPAN10Q9H1Z9 355 aaPredicted RBP12.2□□□□□ -0.46
SSB-203ENST00000413002 OLAHQ9NV23 265 aa12.2□□□□□ -0.46
SSB-203ENST00000413002 MYOTQ9UBF9 498 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms