RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 CDK3Q00526 305 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 TYSND1Q2T9J0 566 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 LYSMD4Q5XG99 296 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 PNCKQ6P2M8 343 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 KCTD18Q6PI47 426 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 FIP1L1Q6UN15 594 aaKnown RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 PLEKHG7Q6ZR37 379 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 ZNF784Q8NCA9 323 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 OR2T33Q8NG76 320 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 HLA-CQ95604 372 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 HHIPQ96QV1 700 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 SERINC2Q96SA4 455 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 ZIC5Q96T25 663 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 SP140LQ9H930 580 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 BRF2Q9HAW0 419 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 SNNO75324 88 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 CCNKO75909 580 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 FGF4P08620 206 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 RHCEP18577 417 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 EN2P19622 333 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 ZNF84P51523 738 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 CLRN1P58418 232 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 SLC3A1Q07837 685 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 CLCA4Q14CN2 919 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 LRRC26Q2I0M4 334 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 FAM78AQ5JUQ0 283 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 SLC35F1Q5T1Q4 408 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 ZNF627Q7L945 461 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 GPAT4Q86UL3 456 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 JAGN1Q8N5M9 183 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 VN1R2Q8NFZ6 395 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 OR7G3Q8NG95 312 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 OR6C4Q8NGE1 309 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 LRRC46Q96FV0 321 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 ZNF304Q9HCX3 659 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 CCM2LQ9NUG4 571 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 TUBA8Q9NY65 449 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 DKK3Q9UBP4 350 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 GNG8Q9UK08 70 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 PTGDR2Q9Y5Y4 395 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 A0A0J9YY10 115 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 PROM1O43490 865 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 INMTO95050 263 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 HOXD9P28356 352 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 HLA-FP30511 346 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 EIF1AXP47813 144 aaKnown RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 ERVFC1P60507 584 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 FAM189BP81408 668 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 MADCAM1Q13477 382 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 TUBA3CQ13748 450 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 NNATQ16517 81 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 NDUFAF5Q5TEU4 345 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 C6orf89Q6UWU4 347 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 PIANPQ8IYJ0 282 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 OR52N2Q8NGI0 321 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 FAM174AQ8TBP5 190 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 THAP3Q8WTV1 239 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 DNAJA4Q8WW22 397 aaPredicted RBP8.68□□□□□ -1.02
PBRM1-208ENST00000410007 TIMM29Q9BSF4 260 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 ZBP1Q9H171 429 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 DCSTAMPQ9H295 470 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 DNAJC27Q9NZQ0 273 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 ZNF451Q9Y4E5 1061 aa8.68□□□□□ -1.02
PBRM1-208ENST00000410007 POLR1CO15160 346 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-208ENST00000410007 NUAK1O60285 661 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 CLCN2P51788 898 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 TUBA1BP68363 451 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 TUBA4AP68366 448 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 TSTQ16762 297 aaKnown RBP8.67□□□□□ -1.02
PBRM1-208ENST00000410007 ZNF789Q5FWF6 425 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 C1orf189Q5VU69 101 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 CHRDL2Q6WN34 429 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 TUBA1AQ71U36 451 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 TOR1AIP2Q8NFQ8 470 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 ARRDC2Q8TBH0 407 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 TREX1Q9NSU2 369 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 UBAP1Q9NZ09 502 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 ACTR10Q9NZ32 417 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 OR6C2Q9NZP2 312 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 A0A0G2JPF8 293 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 UNC119BA6NIH7 251 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 HNRNPCL3B7ZW38 293 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 H0YAE9 185 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 EDIL3O43854 480 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 PRAMEF2O60811 474 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 OXSR1O95747 527 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-208ENST00000410007 HPRP00739 348 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 HNRNPCL4P0DMR1 293 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 HOXD8P13378 290 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-208ENST00000410007 HTR6P50406 440 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 SWI5Q1ZZU3 235 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 PSD4Q8NDX1 1056 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 OR2L2Q8NH16 312 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 NSMAFQ92636 917 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 TMEM203Q969S6 136 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 NAA11Q9BSU3 229 aaPredicted RBP8.67□□□□□ -1.02
PBRM1-208ENST00000410007 DUSP23Q9BVJ7 150 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 SRPK3Q9UPE1 567 aa8.67□□□□□ -1.02
PBRM1-208ENST00000410007 G3V2L1 256 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms