RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 GTF2F2P13984 249 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 CRISP1P54107 249 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 CDK6Q00534 326 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SCGB2A2Q13296 93 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 FAM205BPQ63HN1 556 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 THAP6Q8TBB0 222 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ELP5Q8TE02 316 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 CPNE2Q96FN4 548 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF845Q96IR2 970 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 NEDD4LQ96PU5 975 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 VRK1Q99986 396 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 S100A14Q9HCY8 104 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 GCM1Q9NP62 436 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 CLEC4EQ9ULY5 219 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 BAIAP2Q9UQB8 552 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 RCBTB2O95199 551 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 TSHRP16473 764 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 AK4P27144 223 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 POLR2HP52434 150 aaKnown RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SIM1P81133 766 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ST3GAL3Q11203 375 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SHFQ7M4L6 423 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 OR52E2Q8NGJ4 325 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 FOXJ1Q92949 421 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ECHDC3Q96DC8 303 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 FAM230AA0A1W2PPH8 454 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 BEST1O76090 585 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 TMEM69Q5SWH9 247 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 LRRC55Q6ZSA7 311 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 TCEAL8Q8IYN2 117 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 EIF5A2Q9GZV4 153 aaKnown RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 RPF2Q9H7B2 306 aaKnown RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SMPD3Q9NY59 655 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 HSFX1Q9UBD0 423 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 PRPF19Q9UMS4 504 aaKnown RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 CCDC88CQ9P219 2028 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 CAPN5O15484 640 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 TIMP1P01033 207 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 C6P13671 934 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF43P17038 809 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 OGNP20774 298 aaKnown RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SLC15A1P46059 708 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 CAMK2DQ13557 499 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 PRAMEF8Q5VWM4 474 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 PRAMEF7Q5VXH5 474 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 BATF2Q8N1L9 274 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 OR51L1Q8NGJ5 315 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 GEMIN6Q8WXD5 167 aaKnown RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 RNF215Q9Y6U7 377 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 FRMPD1Q5SYB0 1578 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 NPIPA5A0A0B4J1W7 369 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SHISA7A6NL88 538 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 NPIPA7E9PJI5 369 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 HTR3BO95264 441 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 RPLP0P05388 317 aaKnown RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 NPIPA8P0DM63 369 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 CD36P16671 472 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 DUOXA1Q1HG43 343 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ACSBG2Q5FVE4 666 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 NCBP2-AS2Q69YL0 99 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 DDIT4LQ96D03 193 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 PDLIM2Q96JY6 352 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ST6GALNAC5Q9BVH7 336 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ZBTB26Q9HCK0 441 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SLCO3A1Q9UIG8 710 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 A0A0G2JPF8 293 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 TTLL8A6PVC2 850 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 HNRNPCL3B7ZW38 293 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 MPZL2O60487 215 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 HNRNPCL4P0DMR1 293 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 TMEM225BP0DP42 221 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 HAPLN1P10915 354 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 PRPS1L1P21108 318 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 CRHBPP24387 322 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ZXDBP98169 803 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 DOC2AQ14183 400 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ZNF619Q8N2I2 560 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 NDNFQ8TB73 568 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 OR6C1Q96RD1 312 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 MCHR1Q99705 422 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SSX3Q99909 188 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 OR2S2Q9NQN1 319 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 MED11Q9P086 117 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 PDE10AQ9Y233 779 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 LMTK2Q8IWU2 1503 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SERTM1A2A2V5 107 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 ALOX15BO15296 676 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 PPM1BO75688 479 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 G6PDP11413 515 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 HOXB9P17482 250 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 AKR1C2P52895 323 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 DEFB103AP81534 67 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 SCAPQ12770 1279 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 TRIM61Q5EBN2 209 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 P2RY8Q86VZ1 359 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 CROCCP3Q8IVE0 287 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 MFSD8Q8NHS3 518 aa8.06□□□□□ -1.12
SCN9A-203ENST00000409672 GPN2Q9H9Y4 310 aaPredicted RBP8.06□□□□□ -1.12
SCN9A-203ENST00000409672 FTCDNL1E5RQL4 147 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms