RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 GVQW1Q8N7I0 195 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ZNF491Q8N8L2 437 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 TBCKQ8TEA7 893 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 GTSF1Q8WW33 167 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 BADQ92934 168 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 PANX3Q96QZ0 392 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ABCC13Q9NSE7 274 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 RCOR3Q9P2K3 495 aaPredicted RBP3.01□□□□□ -1.93
PMS1-203ENST00000409593 RNF212BA8MTL3 300 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 E2F3O00716 465 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 MTIF2P46199 727 aaKnown RBP3.01□□□□□ -1.93
PMS1-203ENST00000409593 KCNK10P57789 538 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ST8SIA6P61647 398 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 MFGE8Q08431 387 aaPredicted RBP3.01□□□□□ -1.93
PMS1-203ENST00000409593 LCP2Q13094 533 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 WSCD2Q2TBF2 565 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 GBP6Q6ZN66 633 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ASPGQ86U10 573 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 C17orf64Q86WR6 236 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 KRTAP11-1Q8IUC1 163 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 NUP93Q8N1F7 819 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 SSX3Q99909 188 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 AGPAT1Q99943 283 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 CXXC4Q9H2H0 198 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 GRPEL1Q9HAV7 217 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 IL1RL2Q9HB29 575 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 AMBNQ9NP70 447 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 DNAJC17Q9NVM6 304 aaKnown RBP3.01□□□□□ -1.93
PMS1-203ENST00000409593 ZNF446Q9NWS9 450 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 ERVK-19Q9WJR5 959 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 RNF24Q9Y225 148 aa3.01□□□□□ -1.93
PMS1-203ENST00000409593 FAM149AA5PLN7 773 aa3□□□□□ -1.93
PMS1-203ENST00000409593 GAS8O95995 478 aa3□□□□□ -1.93
PMS1-203ENST00000409593 CCDC159P0C7I6 412 aa3□□□□□ -1.93
PMS1-203ENST00000409593 P4HA1P13674 534 aa3□□□□□ -1.93
PMS1-203ENST00000409593 MEF2DQ14814 521 aa3□□□□□ -1.93
PMS1-203ENST00000409593 UNC50Q53HI1 259 aa3□□□□□ -1.93
PMS1-203ENST00000409593 NHLRC1Q6VVB1 395 aa3□□□□□ -1.93
PMS1-203ENST00000409593 SIAH3Q8IW03 269 aa3□□□□□ -1.93
PMS1-203ENST00000409593 CHDHQ8NE62 594 aaPredicted RBP3□□□□□ -1.93
PMS1-203ENST00000409593 ZNF671Q8TAW3 534 aa3□□□□□ -1.93
PMS1-203ENST00000409593 GOLGA5Q8TBA6 731 aa3□□□□□ -1.93
PMS1-203ENST00000409593 SNRNP40Q96DI7 357 aaKnown RBP3□□□□□ -1.93
PMS1-203ENST00000409593 B3GALT6Q96L58 329 aa3□□□□□ -1.93
PMS1-203ENST00000409593 ACPTQ9BZG2 426 aa3□□□□□ -1.93
PMS1-203ENST00000409593 TDRD6O60522 2096 aaKnown RBP2.99□□□□□ -1.93
PMS1-203ENST00000409593 C13orf42A0A1B0GVH6 325 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 GIG44P09565 113 aaPredicted RBP2.99□□□□□ -1.93
PMS1-203ENST00000409593 GABPAQ06546 454 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 HEPACAMQ14CZ8 416 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 P2RY14Q15391 338 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 RPS6KA1Q15418 735 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 OR1C1Q15619 314 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 MEP1BQ16820 701 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 ANKRD55Q3KP44 614 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 WDR25Q64LD2 544 aaPredicted RBP2.99□□□□□ -1.93
PMS1-203ENST00000409593 PAMR1Q6UXH9 720 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 CLYBLQ8N0X4 340 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 OR4F5Q8NH21 305 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 NTNG2Q96CW9 530 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 RAB3CQ96E17 227 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 S1PR3Q99500 378 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 NUSAP1Q9BXS6 441 aaKnown RBP2.99□□□□□ -1.93
PMS1-203ENST00000409593 GDF3Q9NR23 364 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 MIS18AQ9NYP9 233 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 SEC14L4Q9UDX3 406 aa2.99□□□□□ -1.93
PMS1-203ENST00000409593 A4D1N5 150 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 SLC33A1O00400 549 aaPredicted RBP2.98□□□□□ -1.93
PMS1-203ENST00000409593 SAP18O00422 153 aaKnown RBP2.98□□□□□ -1.93
PMS1-203ENST00000409593 PDGFBP01127 241 aaPredicted RBP2.98□□□□□ -1.93
PMS1-203ENST00000409593 EPOP01588 193 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 HSP90AB1P08238 724 aaKnown RBP2.98□□□□□ -1.93
PMS1-203ENST00000409593 NUDT17P0C025 328 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 SBK2P0C263 348 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 ZNF19P17023 458 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 SERPINB6P35237 376 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 RFTN1Q14699 578 aaPredicted RBP2.98□□□□□ -1.93
PMS1-203ENST00000409593 GSG1Q2KHT4 349 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 C1orf189Q5VU69 101 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 TMEM126BQ8IUX1 230 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 ARL14Q8N4G2 192 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 GOT1L1Q8NHS2 421 aaPredicted RBP2.98□□□□□ -1.93
PMS1-203ENST00000409593 CXorf58Q96LI9 332 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 TEX13BQ9BXU2 312 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 DEFB126Q9BYW3 111 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 NAPBQ9H115 298 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 SLC25A19Q9HC21 320 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 ZNF275Q9NSD4 429 aaPredicted RBP2.98□□□□□ -1.93
PMS1-203ENST00000409593 TEKT2Q9UIF3 430 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 EXOC7Q9UPT5 735 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 KLF18A0A0U1RQI7 1052 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 SH3PXD2BA1X283 911 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 STX6O43752 255 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 CHRNGP07510 517 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 TPBGLP0DKB5 382 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 ZBTB25P24278 435 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 FASP25445 335 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 FNTAP49354 379 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 TNFSF10P50591 281 aa2.98□□□□□ -1.93
PMS1-203ENST00000409593 SCARB2Q14108 478 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms