RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 DUXAA6NLW8 204 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 MAGEB3O15480 346 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 ADPRHP54922 357 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 VAMP2P63027 116 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 ADAM8P78325 824 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 KIR2DS3Q14952 304 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 KRBOX4Q5JUW0 171 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 DCST2Q5T1A1 773 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 UNC5DQ6UXZ4 953 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 OAFQ86UD1 273 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 PHOSPHO1Q8TCT1 267 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 XAGE5Q8WWM1 108 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 PTERQ96BW5 349 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 ITPKCQ96DU7 683 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 VRTNQ9H8Y1 702 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 FGF21Q9NSA1 209 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 CUTCQ9NTM9 273 aa6.99□□□□□ -1.29
SCN9A-202ENST00000409435 RAB19A4D1S5 217 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 CCL22O00626 93 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 LRP3O75074 770 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 ZFAND5O76080 213 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 CST1P01037 141 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 GSTT2P0CG29 244 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 GBE1Q04446 702 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 TMEM196Q5HYL7 178 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 PLEKHS1Q5SXH7 462 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 PTCHD4Q6ZW05 846 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 DPPA2Q7Z7J5 298 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 SATL1Q86VE3 508 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 SLC34A3Q8N130 599 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 MFSD8Q8NHS3 518 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 SETD6Q8TBK2 473 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 ZBED6CLQ96FA7 236 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-202ENST00000409435 DPH7Q9BTV6 452 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 DOHHQ9BU89 302 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 DHRS12A0PJE2 317 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 ATP6V1G2-DDX39BF2Z307 99 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 FSCN2O14926 492 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 SLC22A1O15245 554 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 AGR2O95994 175 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 HSD17B7P56937 341 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 LYPD8Q6UX82 237 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 IQCHQ86VS3 1027 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 ARHGAP12Q8IWW6 846 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 CCDC116Q8IYX3 515 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 SLC22A15Q8IZD6 547 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 ARMC10Q8N2F6 343 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 IL17RCQ8NAC3 791 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 SLC37A3Q8NCC5 494 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 TIMM29Q9BSF4 260 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 TPK1Q9H3S4 243 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 UFSP2Q9NUQ7 469 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 BCORQ6W2J9 1755 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 TRBV11-1A0A0K0K1C0 115 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 CBY3A6NI87 242 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 SCO2O43819 266 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 BEST1O76090 585 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 LRATO95237 230 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 CYP4B1P13584 511 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 RPS3P23396 243 aaKnown RBP eCLIP6.98□□□□□ -1.29
SCN9A-202ENST00000409435 HSPA7P48741 367 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 SSR4P51571 173 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 TGFBR3Q03167 851 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 PCDH1Q08174 1060 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 LRIF1Q5T3J3 769 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 DNAJC14Q6Y2X3 702 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-202ENST00000409435 USP51Q70EK9 711 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 EXD3Q8N9H8 876 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 OR13C4Q8NGS5 318 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 COQ8AQ8NI60 647 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 CLPTM1LQ96KA5 538 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 WSB2Q9NYS7 404 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-202ENST00000409435 CCDC167Q9P0B6 97 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 ABCD2Q9UBJ2 740 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 DDX60Q8IY21 1712 aaKnown RBP6.98□□□□□ -1.29
SCN9A-202ENST00000409435 PHIPQ8WWQ0 1821 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 OR6C6A6NF89 314 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 RIPK2O43353 540 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 RSL1D1O76021 490 aaKnown RBP6.98□□□□□ -1.29
SCN9A-202ENST00000409435 MT-CO1P00395 513 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 IL2RAP01589 272 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 GLB1P16278 677 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 HLA-FP30511 346 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 ALDH3B2P48448 385 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 MECP2P51608 486 aaKnown RBP6.98□□□□□ -1.29
SCN9A-202ENST00000409435 SP140Q13342 867 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 EIPR1Q53HC9 387 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 PAPD7Q5XG87 772 aaKnown RBP6.98□□□□□ -1.29
SCN9A-202ENST00000409435 NAPRTQ6XQN6 538 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 MOB1BQ7L9L4 216 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 LDB1Q86U70 411 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-202ENST00000409435 RANBP3LQ86VV4 465 aaPredicted RBP6.98□□□□□ -1.29
SCN9A-202ENST00000409435 CPNE9Q8IYJ1 553 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 KDM1BQ8NB78 822 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 GOLM1Q8NBJ4 401 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 DNAAF1Q8NEP3 725 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 OR2L3Q8NG85 312 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 ACTRT1Q8TDG2 376 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 TCP10LQ8TDR4 215 aa6.98□□□□□ -1.29
SCN9A-202ENST00000409435 FCGR1BQ92637 280 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms