RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ERLIN1O75477 346 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 GNLYP22749 145 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 CYB561P49447 251 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 ACSM2AQ08AH3 577 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 SPDYAQ5MJ70 313 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 ZNF468Q5VIY5 522 aaPredicted RBP16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 ACSM2BQ68CK6 577 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 FAM180AQ6UWF9 173 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 DGAT2L6Q6ZPD8 337 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 MDS2Q8NDY4 140 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 OR4K14Q8NGD5 310 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 ZNF721Q8TF20 911 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 FAR1Q8WVX9 515 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 ZBTB9Q96C00 473 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 ZIM3Q96PE6 472 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 BARD1Q99728 777 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 TRMOQ9BU70 441 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 MECRQ9BV79 373 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 LIN28AQ9H9Z2 209 aaKnown RBP16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 KLHL1Q9NR64 748 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 LRFN1Q9P244 771 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 MCM8Q9UJA3 840 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 PCDHA9Q9Y5H5 950 aa16.69■□□□□ 0.26
PDLIM2-206ENST00000409141 C1orf226A1L170 272 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 CTIFO43310 598 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 TYROBPO43914 113 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 ITGA10O75578 1167 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 RASAL1O95294 804 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 SLC35E2P0CK97 266 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 UROSP10746 265 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 CD46P15529 392 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 TRHRP34981 398 aaPredicted RBP16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 UQCRFS1P47985 274 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 HLCSP50747 726 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 TRA2BP62995 288 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 NR6A1Q15406 480 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 INAQ16352 499 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 IMPG1Q17R60 797 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 SPIN4Q56A73 249 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 CROCCP2Q86T23 111 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 TMEM156Q8N614 296 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 BCORP1Q8N888 145 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 DOK4Q8TEW6 326 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 APIPQ96GX9 242 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 ART5Q96L15 291 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 C5orf34Q96MH7 638 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 FAIM2Q9BWQ8 316 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 TNFRSF12AQ9NP84 129 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 YARS2Q9Y2Z4 477 aaKnown RBP16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 SHANK1Q9Y566 2161 aa16.68■□□□□ 0.26
PDLIM2-206ENST00000409141 GNG14A0A1W2PPG7 69 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 PCDH7O60245 1069 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 NEURL1O76050 574 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 ZIC2O95409 532 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 XKP51811 444 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 RNF4P78317 190 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 ZNF267Q14586 743 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 CLEC6AQ6EIG7 209 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 OR5L2Q8NGL0 311 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 OR8K3Q8NH51 312 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 RIT1Q92963 219 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 TAAR6Q96RI8 345 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 CNPPD1Q9BV87 410 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 RRAGDQ9NQL2 400 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 MYOTQ9UBF9 498 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 PSME2Q9UL46 239 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 PCDHGB6Q9Y5F9 930 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 FLNCQ14315 2725 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 A0A1W2PS29 197 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 TMEM200CA6NKL6 621 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 HRKO00198 91 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 AZIN1O14977 448 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 NPHS1O60500 1241 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 OR2J2O76002 312 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 CBX6O95503 412 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 SP1P08047 785 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 GALNSP34059 522 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 ALDH9A1P49189 494 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 SSR4P51571 173 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 RAE1P78406 368 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 MRPL49Q13405 166 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 MAPKAPK3Q16644 382 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 SLC25A25Q6KCM7 469 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 SLC48A1Q6P1K1 146 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 LRIG3Q6UXM1 1119 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 C16orf47Q6ZP98 133 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 TRIM46Q7Z4K8 759 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 EXOC3L1Q86VI1 746 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 MMP21Q8N119 569 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 TMEM178AQ8NBL3 297 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 TMEM125Q96AQ2 219 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 FBXL20Q96IG2 436 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 HES7Q9BYE0 225 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 TRIM45Q9H8W5 580 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 EML4Q9HC35 981 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 OLAHQ9NV23 265 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 CES1P1Q9UKY3 287 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 FIS1Q9Y3D6 152 aa16.67■□□□□ 0.26
PDLIM2-206ENST00000409141 GOLGA6L10A6NI86 522 aa16.66■□□□□ 0.26
PDLIM2-206ENST00000409141 WWP2O00308 870 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms