RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CXorf21Q9HAI6 301 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 FGF22Q9HCT0 170 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 SCN3BQ9NY72 215 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 SPASTQ9UBP0 616 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 KLF15Q9UIH9 416 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 SLC17A4Q9Y2C5 497 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 TPRKBQ9Y3C4 175 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 PCDHGB3Q9Y5G1 929 aa12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 TP53BP1Q12888 1972 aaPredicted RBP12.26□□□□□ -0.45
SMARCB1-203ENST00000407082 PCM1Q15154 2024 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 PRSS38A1L453 326 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 ADAMDEC1O15204 470 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 TNFP01375 233 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 FUCA1P04066 466 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 CSF2P04141 144 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 SLC35G4P0C7Q5 338 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 JUNDP17535 347 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 IGFBP5P24593 272 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 ACP1P24666 158 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 GSTM2P28161 218 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 PRIM2P49643 509 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 BLKP51451 505 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 CCR8P51685 355 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 TMBIM6P55061 237 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 CXCR4P61073 352 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 TRA2BP62995 288 aaKnown RBP12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 CTBSQ01459 385 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 PDE7AQ13946 482 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 ZNF630Q2M218 657 aaPredicted RBP12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 ALG11Q2TAA5 492 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 CCSMST1Q4G0I0 132 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 C6orf141Q5SZD1 244 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 GCNT6Q5T4J0 391 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 METRNLQ641Q3 311 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 FAM71E1Q6IPT2 247 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 CCDC81Q6ZN84 652 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 KCTD8Q6ZWB6 473 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 COMMD6Q7Z4G1 85 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 CROCCP3Q8IVE0 287 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 LRRC56Q8IYG6 542 aaPredicted RBP12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 OFCC1Q8IZS5 231 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 PIK3C3Q8NEB9 887 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 GPR156Q8NFN8 814 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 OR5K2Q8NHB8 316 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 NUDT8Q8WV74 236 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 OR1E3Q8WZA6 343 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 ZNF566Q969W8 418 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 PDXPQ96GD0 296 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 BCL7BQ9BQE9 202 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 DOHHQ9BU89 302 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 ADNPQ9H2P0 1102 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 TMEM38AQ9H6F2 299 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 POLR1BQ9H9Y6 1135 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 CARS2Q9HA77 564 aaKnown RBP12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 CCNB1IP1Q9NPC3 277 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 THSD1Q9NS62 852 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 SLC6A13Q9NSD5 602 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 THUMPD1Q9NXG2 353 aaKnown RBP12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 KIF17Q9P2E2 1029 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 ADAM29Q9UKF5 820 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 PNMA8BQ9ULN7 279 aaPredicted RBP12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 ICKQ9UPZ9 632 aa12.25□□□□□ -0.45
SMARCB1-203ENST00000407082 MYOCOSA0A1B0GUC4 107 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 C1orf226A1L170 272 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 EME2A4GXA9 379 aaPredicted RBP12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 A8MVJ9 347 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 MYO1GB0I1T2 1018 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 BCKDKO14874 412 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 SCAMP1O15126 338 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 CSO75390 466 aaKnown RBP12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 RASGRP1O95267 797 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 CPNE6O95741 557 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 C9P02748 559 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 SEMG1P04279 462 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 FURINP09958 794 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 ERGP11308 486 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 ETS2P15036 469 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 NME1P15531 152 aaKnown RBP12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 NELFEP18615 380 aaKnown RBP12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 UQCRC2P22695 453 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 DCKP27707 260 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 RBMS1P29558 406 aaKnown RBP12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 MAGEA8P43361 318 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 LSSP48449 732 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 CDH15P55291 814 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 ITGA1P56199 1179 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 HNRNPKP61978 463 aaKnown RBP eCLIP12.24□□□□□ -0.454e-10■■■■□ 21
SMARCB1-203ENST00000407082 DMPKQ09013 629 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 KCNAB2Q13303 367 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 NFE2L1Q14494 772 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 HEPACAMQ14CZ8 416 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 PLCL1Q15111 1095 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 PYCR3Q53H96 274 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 ZNF691Q5VV52 312 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 AP1ARQ63HQ0 302 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 CRTC3Q6UUV7 619 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 CCDC80Q76M96 950 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 PTOV1Q86YD1 416 aa12.24□□□□□ -0.45
SMARCB1-203ENST00000407082 LILRA3Q8N6C8 439 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms