RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 NEUROG3Q9Y4Z2 214 aa19.24■□□□□ 0.67
CHKB-201ENST00000406938 TEX51A0A1B0GUA7 166 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 OR2W5A6NFC9 320 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 STK17BO94768 372 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 ANP32DO95626 131 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 GPR75O95800 540 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 GSNP06396 782 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 HOXB9P17482 250 aaPredicted RBP19.23■□□□□ 0.67
CHKB-201ENST00000406938 CSNK2A2P19784 350 aaPredicted RBP19.23■□□□□ 0.67
CHKB-201ENST00000406938 IL10P22301 178 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 PTPN6P29350 595 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 TRPC1P48995 793 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 XKP51811 444 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 HSD17B7P56937 341 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 BTG2P78543 158 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 LCN10Q6JVE6 187 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 C8orf82Q6P1X6 216 aaPredicted RBP19.23■□□□□ 0.67
CHKB-201ENST00000406938 C16orf89Q6UX73 402 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 ASRGL1Q7L266 308 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 SCUBE1Q8IWY4 988 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 SAMD14Q8IZD0 417 aaPredicted RBP19.23■□□□□ 0.67
CHKB-201ENST00000406938 DEFB107AQ8IZN7 70 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 PGAM4Q8N0Y7 254 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 LRRC25Q8N386 305 aaPredicted RBP19.23■□□□□ 0.67
CHKB-201ENST00000406938 GALNT15Q8N3T1 639 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 KIF2BQ8N4N8 673 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 DNAJB8Q8NHS0 232 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 OR5P2Q8WZ92 322 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 FOXJ2Q9P0K8 574 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 VAPAQ9P0L0 249 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 IFT80Q9P2H3 777 aaPredicted RBP19.23■□□□□ 0.67
CHKB-201ENST00000406938 CROTQ9UKG9 612 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 PCDHGB4Q9UN71 923 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 PCDHGA7Q9Y5G6 932 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 WDFY3Q8IZQ1 3526 aa19.23■□□□□ 0.67
CHKB-201ENST00000406938 IGLV3-12A0A075B6K2 115 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 TGFBR3LH3BV60 316 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 ERN1O75460 977 aaKnown RBP19.22■□□□□ 0.67
CHKB-201ENST00000406938 NPPAP01160 153 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 KLK3P07288 261 aaPredicted RBP19.22■□□□□ 0.67
CHKB-201ENST00000406938 CPMP14384 443 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 MAOAP21397 527 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 AGXTP21549 392 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 PTGER1P34995 402 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 GAB1Q13480 694 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 MLC1Q15049 377 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 MINDY4Q4G0A6 757 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 DNAL1Q4LDG9 190 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 MFSD4BQ5TF39 518 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 TMEM164Q5U3C3 297 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 MED25Q71SY5 747 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 MSRB3Q8IXL7 192 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 CCDC116Q8IYX3 515 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 GALNT6Q8NCL4 622 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 GOT1L1Q8NHS2 421 aaPredicted RBP19.22■□□□□ 0.67
CHKB-201ENST00000406938 ZFP28Q8NHY6 868 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 CGREF1Q99674 301 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 DPH2Q9BQC3 489 aaPredicted RBP19.22■□□□□ 0.67
CHKB-201ENST00000406938 AKIRIN1Q9H9L7 192 aaPredicted RBP19.22■□□□□ 0.67
CHKB-201ENST00000406938 NEUROD4Q9HD90 331 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 TAS2R9Q9NYW1 312 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 SLC25A37Q9NYZ2 338 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 PCDHB14Q9Y5E9 798 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 CNOT1A5YKK6 2376 aaKnown RBP19.22■□□□□ 0.67
CHKB-201ENST00000406938 TRBV5-3A0A0A0MS03 114 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 MYOCOSA0A1B0GUC4 107 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 DCDC2BA2VCK2 349 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 CTNSO60931 367 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 TNFSF15O95150 251 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 MPIP34949 423 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 PSME3P61289 254 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 OCA2Q04671 838 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 OVCH1Q7RTY7 1134 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 PRSS58Q8IYP2 241 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 STT3BQ8TCJ2 826 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 FKBP10Q96AY3 582 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 GPATCH1Q9BRR8 931 aaKnown RBP19.22■□□□□ 0.67
CHKB-201ENST00000406938 TRIM8Q9BZR9 551 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 TGIF2Q9GZN2 237 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 C14orf105Q9NVL8 296 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.22■□□□□ 0.67
CHKB-201ENST00000406938 PCDHGA8Q9Y5G5 932 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 CLDN16Q9Y5I7 305 aa19.22■□□□□ 0.67
CHKB-201ENST00000406938 NVLO15381 856 aaKnown RBP19.21■□□□□ 0.67
CHKB-201ENST00000406938 DLGAP3O95886 979 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 PORP16435 677 aaPredicted RBP19.21■□□□□ 0.67
CHKB-201ENST00000406938 SDHBP21912 280 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 CDK9P50750 372 aaKnown RBP19.21■□□□□ 0.67
CHKB-201ENST00000406938 STX4Q12846 297 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 LTB4RQ15722 352 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 FAM199XQ6PEV8 388 aaPredicted RBP19.21■□□□□ 0.67
CHKB-201ENST00000406938 QSOX2Q6ZRP7 698 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 ZNF621Q6ZSS3 439 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 TMPRSS7Q7RTY8 843 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 OR9A2Q8NGT5 310 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 MR1Q95460 341 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 AURKBQ96GD4 344 aaPredicted RBP19.21■□□□□ 0.67
CHKB-201ENST00000406938 HOPXQ9BPY8 73 aaPredicted RBP19.21■□□□□ 0.67
CHKB-201ENST00000406938 TRIM4Q9C037 500 aa19.21■□□□□ 0.67
CHKB-201ENST00000406938 CXorf36Q9H7Y0 433 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms