RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 SLC35F1Q5T1Q4 408 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ZNF697Q5TEC3 545 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 SMARCD3Q6STE5 483 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 TEX261Q6UWH6 196 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 OTOP2Q7RTS6 562 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 METTL3Q86U44 580 aaKnown RBP5.61□□□□□ -1.51
HDAC9-203ENST00000406072 TMEM86AQ8N2M4 240 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 SLC5A8Q8N695 610 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 B3GNT7Q8NFL0 401 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 TTLQ8NG68 377 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 OR4D10Q8NGI6 311 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 OR10K1Q8NGX5 313 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 FAM110BQ8TC76 370 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 NETO1Q8TDF5 533 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 CLEC4CQ8WTT0 213 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 CNOT9Q92600 299 aaKnown RBP5.61□□□□□ -1.51
HDAC9-203ENST00000406072 PPCDCQ96CD2 204 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ZNF419Q96HQ0 510 aaPredicted RBP5.61□□□□□ -1.51
HDAC9-203ENST00000406072 C3orf30Q96M34 536 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ZNF578Q96N58 590 aaPredicted RBP5.61□□□□□ -1.51
HDAC9-203ENST00000406072 SAP130Q9H0E3 1048 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 SPNS1Q9H2V7 528 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ASB8Q9H765 288 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ACOXLQ9NUZ1 547 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ZNF225Q9UK10 706 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 DYRK1BQ9Y463 629 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 U3KQ87 197 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 NEDD8-MDP1E9PL57 170 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 CLDN5O00501 218 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 PCDHGA12O60330 932 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 PRAMEF2O60811 474 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ZNF254O75437 659 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 RPP40O75818 363 aaKnown RBP5.61□□□□□ -1.51
HDAC9-203ENST00000406072 MATN4O95460 622 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 RAB36O95755 333 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 CH25HO95992 272 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 PTHP01270 115 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ADRB1P08588 477 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 GLULP15104 373 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 SELPP16109 830 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 RHCEP18577 417 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 VAMP1P23763 118 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 G0S2P27469 103 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 VIPR1P32241 457 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 AGTR2P50052 363 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 MAP2K6P52564 334 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 CAV3P56539 151 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 CTBP2P56545 445 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 DSC1Q08554 894 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 COL19A1Q14993 1142 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 Q3ZCU0 254 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 NOMO2Q5JPE7 1267 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ATG9BQ674R7 924 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 SLC30A6Q6NXT4 461 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 Q6ZPB1 254 aaPredicted RBP5.61□□□□□ -1.51
HDAC9-203ENST00000406072 LARP4Q71RC2 724 aaKnown RBP eCLIP5.61□□□□□ -1.51
HDAC9-203ENST00000406072 BEST3Q8N1M1 668 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 CPA6Q8N4T0 437 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 C1orf127Q8N9H9 656 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 OR1M1Q8NGA1 313 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 TMEM40Q8WWA1 233 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 GGHQ92820 318 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ST6GAL2Q96JF0 529 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 SERPINB11Q96P15 392 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 OR2M2Q96R28 347 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 MGME1Q9BQP7 344 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 C1QTNF7Q9BXJ2 289 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 AGO3Q9H9G7 860 aaKnown RBP5.61□□□□□ -1.51
HDAC9-203ENST00000406072 AHSPQ9NZD4 102 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 SNX10Q9Y5X0 201 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 NUBP2Q9Y5Y2 271 aa5.61□□□□□ -1.51
HDAC9-203ENST00000406072 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 A0A0G2JMP0 313 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 IQCF5A8MTL0 148 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ARHGAP33O14559 1287 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SYN3O14994 580 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 AGPAT2O15120 278 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 FGF10O15520 208 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 B4GALT5O43286 388 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 KERAO60938 352 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ANXA4P09525 319 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 CD3GP09693 182 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 CKBP12277 381 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 LPOP22079 712 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 NFYAP23511 347 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ITPKAP23677 461 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 MC4RP32245 332 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 CNR2P34972 360 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 MEOX2P50222 304 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 SKP1P63208 163 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 BEX3Q00994 111 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 BIKQ13323 160 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ZNF177Q13360 481 aaPredicted RBP5.6□□□□□ -1.51
HDAC9-203ENST00000406072 BATFQ16520 125 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 TCTE1Q5JU00 501 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 PLAG1Q6DJT9 500 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ZFAND4Q86XD8 727 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 ARMC10Q8N2F6 343 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 OR4M2Q8NGB6 313 aa5.6□□□□□ -1.51
HDAC9-203ENST00000406072 CSGALNACT1Q8TDX6 532 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms