RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 NDUFA9Q16795 377 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 RAET1GQ6H3X3 334 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 PGBD2Q6P3X8 592 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 MMP21Q8N119 569 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 LMNTD1Q8N9Z9 388 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 ZBED6CLQ96FA7 236 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-204ENST00000404424 SORBS1Q9BX66 1292 aaKnown RBP10.19□□□□□ -0.78
CLIP4-204ENST00000404424 TSSK6Q9BXA6 273 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF717Q9BY31 904 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-204ENST00000404424 POLR2J2Q9GZM3 115 aaKnown RBP10.19□□□□□ -0.78
CLIP4-204ENST00000404424 NEK6Q9HC98 313 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 SLAMF7Q9NQ25 335 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 ERVK13-1Q9NX77 482 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 SSR3Q9UNL2 185 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 IQCMA0A1B0GVH7 501 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 HYKKA2RU49 373 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 H3BQ06 376 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-204ENST00000404424 HMGN4O00479 90 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 RGS5O15539 181 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 VEGFDO43915 354 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 SH3BP5O60239 455 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 MOSPD3O75425 235 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 CKMT1AP12532 417 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 BSGP35613 385 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 OR2B6P58173 313 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF91Q05481 1191 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 DPTQ07507 201 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 ARHGAP19Q14CB8 494 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 LRRC26Q2I0M4 334 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 CD300LDQ6UXZ3 194 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 TMPRSS11AQ6ZMR5 421 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 C17orf64Q86WR6 236 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF547Q8IVP9 402 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 ADGRF3Q8IZF5 1079 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 OR8H2Q8N162 312 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 FAM26EQ8N5C1 309 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 CELF2-AS1Q8N7Q2 184 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 WFIKKN2Q8TEU8 576 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 SMPDL3AQ92484 453 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 OR2A14Q96R47 310 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 AIF1LQ9BQI0 150 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 FUZQ9BT04 418 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 MS4A8Q9BY19 250 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 POLDIP3Q9BY77 421 aaKnown RBP10.19□□□□□ -0.78
CLIP4-204ENST00000404424 SEMA3GQ9NS98 782 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 C14orf119Q9NWQ9 140 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 DNAJC27Q9NZQ0 273 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 CLEC2DQ9UHP7 191 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 TBC1D24Q9ULP9 559 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 ASF1AQ9Y294 204 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 SNX11Q9Y5W9 270 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 MTCL1Q9Y4B5 1905 aaKnown RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 A0A1W2PRQ8 180 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 SLC9A3R1O14745 358 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 RGS13O14921 159 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 MYL12BO14950 172 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 SEMA7AO75326 666 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 SOX14O95416 240 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 TBX6O95947 436 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 HSD17B2P37059 387 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 FEN1P39748 380 aaKnown RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 SOX3P41225 446 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 HTR3AP46098 478 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 RPS26P62854 115 aaKnown RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 FOXD4Q12950 439 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 TARDBPQ13148 414 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 RPA4Q13156 261 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 DOC2BQ14184 412 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 NFE2L1Q14494 772 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 MLC1Q15049 377 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 SPDYE7PQ495Y7 208 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 RSBN1Q5VWQ0 802 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 KIAA1211LQ6NV74 962 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 DEF8Q6ZN54 512 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 DCUN1D3Q8IWE4 304 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 UBQLNLQ8IYU4 475 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 BARHL1Q9BZE3 327 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 PITHD1Q9GZP4 211 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 OR52A5Q9H2C5 316 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 SIRT3Q9NTG7 399 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 ACSS1Q9NUB1 689 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 SEC14L3Q9UDX4 400 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF221Q9UK13 617 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 HCN2Q9UL51 889 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 RBMX2Q9Y388 322 aaKnown RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 KIF26AQ9ULI4 1882 aaPredicted RBP10.18□□□□□ -0.78
CLIP4-204ENST00000404424 ANHXE9PGG2 379 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 SPINT1O43278 529 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 TPST2O60704 377 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 IL1AP01583 271 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 HBQ1P09105 142 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 ERGP11308 486 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 PSPHP78330 225 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 TRIM60Q495X7 471 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 PDZD3Q86UT5 571 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 PHC2Q8IXK0 858 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 TCEANCQ8N8B7 351 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 TMIEQ8NEW7 156 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 SLC7A13Q8TCU3 470 aa10.18□□□□□ -0.78
CLIP4-204ENST00000404424 ASB15Q8WXK1 588 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms